RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 WNT11O96014 354 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 IFNA7P01567 189 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ISXQ2M1V0 245 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PRSS42Q7Z5A4 293 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ZNF695Q8IW36 515 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 SCN2AQ99250 2005 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 TRDV1A0A1B0GX56 115 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 MCRIP1C9JLW8 97 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 GABARAPO95166 117 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 TGIF1Q15583 401 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 SLC9A3R2Q15599 337 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ALKBH6Q3KRA9 238 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 UBE2NLQ5JXB2 153 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 LYPD4Q6UWN0 246 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 Q6ZTK2 550 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PXKQ7Z7A4 578 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 CARFQ8N187 725 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 OR4D11Q8NGI4 311 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ATF6BQ99941 703 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 TREM1Q9NP99 234 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 LCTP09848 1927 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 H3BUI4 141 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 MTNR1BP49286 362 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 H1FXQ92522 213 aaKnown RBP12.37□□□□□ -0.43
SMC6-201ENST00000351948 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PILRBQ9UKJ0 227 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PSME4Q14997 1843 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 M0QYG6 137 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 TP53P04637 393 aaPredicted RBP12.37□□□□□ -0.43
SMC6-201ENST00000351948 PRSS12P56730 875 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 TIGD3Q6B0B8 471 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 DUSP21Q9H596 190 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 GNG12Q9UBI6 72 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PTPRFP10586 1907 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 PIKFYVEQ9Y2I7 2098 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 HS3ST1O14792 307 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 BPNT1O95861 308 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 HOXB5P09067 269 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 BMP5P22003 454 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 GDNFP39905 211 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 SLC37A1P57057 533 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 OR10A3P58181 314 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 SLC43A2Q8N370 569 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 SLC25A19Q9HC21 320 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 GDF2Q9UK05 429 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 A0A087WZY1 265 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 RAB40ALP0C0E4 278 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 RPA2P15927 270 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 IL13RA1P78552 427 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 DEFA5Q01523 94 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ZXDCQ2QGD7 858 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 METAP1DQ6UB28 335 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 SULF2Q8IWU5 870 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ZNF679Q8IYX0 411 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 RAB40AQ8WXH6 277 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 C11orf40Q8WZ69 217 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ABHD6Q9BV23 337 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 MSL3P1P0C860 447 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 CSF2RBP32927 897 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ZNF610Q8N9Z0 462 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 PHB2Q99623 299 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 HTR2AP28223 471 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 SUMO3P55854 103 aaPredicted RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 PCBP3P57721 371 aaKnown RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 PMPCAQ10713 525 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
SMC6-201ENST00000351948 NICN1Q9BSH3 213 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
SMC6-201ENST00000351948 ARPC5O15511 151 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 PET100P0DJ07 73 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 CCL3P10147 92 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 SOX8P57073 446 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 MZT1Q08AG7 82 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 STX12Q86Y82 276 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 CCDC71Q8IV32 467 aaPredicted RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms