RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 INSM1Q01101 510 aaPredicted RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 SSBP1Q04837 148 aaKnown RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 OR51F2Q8NH61 342 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 Q8WTZ3 238 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 UBE2E3Q969T4 207 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 SLC22A18Q96BI1 424 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 R3HDM4Q96D70 268 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 PRSS16Q9NQE7 514 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 CALML5Q9NZT1 146 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 IL17BQ9UHF5 180 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 A0A087WZY1 265 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 FEZF1A0PJY2 475 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 C9J4A7 227 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 P2RX6O15547 441 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 HKR1P10072 659 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 CKBP12277 381 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 PSEN2P49810 448 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 ZNF136P52737 540 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 C9orf64Q5T6V5 341 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 CST9Q5W186 159 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 FAM129CQ86XR2 697 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 JAGN1Q8N5M9 183 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 OR5AK2Q8NH90 309 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 FAM3DQ96BQ1 224 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 RBM18Q96H35 190 aaKnown RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 NRTNQ99748 197 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 HIST1H2BLQ99880 126 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 NMES1Q9C002 83 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 FAM171A2A8MVW0 826 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 CDC40O60508 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
IFT88-202ENST00000351808 GZMBP10144 247 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 ZNF616Q08AN1 781 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 SLC10A1Q14973 349 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 THEM4Q5T1C6 240 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 OR51A4Q8NGJ6 313 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 TMEM106AQ96A25 262 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 B4GALT6Q9UBX8 382 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 TMED3Q9Y3Q3 217 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 TRPV2Q9Y5S1 764 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
IFT88-202ENST00000351808 EFSO43281 561 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 ZNF432O94892 652 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 TRGC1P0CF51 173 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 HTR2CP28335 458 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 MLC1Q15049 377 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 C4orf17Q53FE4 359 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 TMEM104Q8NE00 496 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 M1APQ8TC57 530 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 RPS4Y2Q8TD47 263 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 CCDC74AQ96AQ1 378 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 ALG14Q96F25 216 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 AQP10Q96PS8 301 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 MS4A8Q9BY19 250 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 ULBP3Q9BZM4 244 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 PRR13Q9NZ81 148 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 FRRS1LQ9P0K9 344 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 PLAGL1Q9UM63 463 aa11.96□□□□□ -0.49
IFT88-202ENST00000351808 A0A087WUJ7 227 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 TGIF2-C20orf24A0A0A6YYL0 155 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 COCHO43405 550 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 IL18BPO95998 194 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 AK4P27144 223 aaPredicted RBP11.96□□□□□ -0.5
IFT88-202ENST00000351808 RASGEF1BQ0VAM2 473 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.5
IFT88-202ENST00000351808 ELOBQ15370 118 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 SLC39A5Q6ZMH5 540 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 LYPD6BQ8NI32 183 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 POC1BQ8TC44 478 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 GNRHR2Q96P88 292 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 ELP3Q9H9T3 547 aa11.96□□□□□ -0.5
IFT88-202ENST00000351808 NUP210Q8TEM1 1887 aaPredicted RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 A0A1B0GV50 99 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CYB5BO43169 146 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 LEFTY1O75610 366 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 THEGLP0DJG4 465 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 IGFALSP35858 605 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 CYCSP99999 105 aaKnown RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
IFT88-202ENST00000351808 OR1Q1Q15612 314 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 ISXQ2M1V0 245 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 PRAMEF8Q5VWM4 474 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 PRAMEF7Q5VXH5 474 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 Q6ZVL8 140 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 THNSL2Q86YJ6 484 aa11.95□□□□□ -0.5
IFT88-202ENST00000351808 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms