RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 MAP3K3Q99759 626 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 CRB3Q9BUF7 120 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 FAM171A2A8MVW0 826 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 EXOSC7Q15024 291 aaKnown RBP6.92□□□□□ -1.3
ATR-201ENST00000350721 TMEM184AQ6ZMB5 413 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 MRPL43Q8N983 215 aaKnown RBP6.92□□□□□ -1.3
ATR-201ENST00000350721 LINC00052Q96N35 136 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 RHOFQ9HBH0 211 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 ACKR4Q9NPB9 350 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 EMC9Q9Y3B6 208 aa6.92□□□□□ -1.3
ATR-201ENST00000350721 BRWD3Q6RI45 1802 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 HOXB1P14653 301 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 ZNF43P17038 809 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SFTPDP35247 375 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 IKZF1Q13422 519 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SLC17A1Q14916 467 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CDKN3Q16667 212 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SPNS2Q8IVW8 549 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 UEVLDQ8IX04 471 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 KLHDC7BQ96G42 594 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 NAA11Q9BSU3 229 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 ZNF768Q9H5H4 540 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 ZCCHC4Q9H5U6 513 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 OR52A1Q9UKL2 312 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 GABRQQ9UN88 632 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.91□□□□□ -1.38e-8■■■■■ 34.2
ATR-201ENST00000350721 MEIS3P1A6NDR6 274 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 TMEM235A6NFC5 223 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 MFSD2BA6NFX1 497 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 GJE1A6NN92 205 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CTAG2O75638 210 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 HOXB5P09067 269 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SLC2A5P22732 501 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 FAM53BQ14153 422 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 INPP5JQ15735 1006 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 NNATQ16517 81 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SGCAQ16586 387 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 LCN10Q6JVE6 187 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 RELL2Q8NC24 303 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 NT5CQ8TCD5 201 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 TOLLIPQ9H0E2 274 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 UQCC1Q9NVA1 299 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CADP27708 2225 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 ZNF587BE7ETH6 402 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 OR2C1O95371 312 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 F13BP05160 661 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 RPL27P61353 136 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 KIAA0141Q14154 515 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 FIP1L1Q6UN15 594 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 RBMXL1Q96E39 390 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 MALSU1Q96EH3 234 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PEX11GQ96HA9 241 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 OR8B4Q96RC9 309 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SLX1AQ9BQ83 275 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PRSS38A1L453 326 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SELENOFO60613 162 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CNN3Q15417 329 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 TMEM151BQ8IW70 566 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 ZNF687Q8N1G0 1237 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PLPP7Q8NBV4 271 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SGIP1Q9BQI5 828 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SARGQ9BW04 601 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 MYOZ1Q9NP98 299 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 LSM5Q9Y4Y9 91 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 LRP5LA4QPB2 252 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PIP5K1CO60331 668 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 HOXD4P09016 255 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 TMEM225BP0DP42 221 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 HHEXQ03014 270 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 NFATC4Q14934 902 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 EBPQ15125 230 aaKnown RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 PHF19Q5T6S3 580 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 TMEM71Q6P5X7 295 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 LCORQ96JN0 433 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 TXNIPQ9H3M7 391 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 NTMQ9P121 344 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 C17orf105B2RV13 164 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CDC42EP2O14613 210 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 GDI1P31150 447 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 Q7L0L9 218 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 OTOSQ8NHW6 89 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 MITD1Q8WV92 249 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 TCTN2Q96GX1 697 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 C4orf45Q96LM5 186 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 LPAR4Q99677 370 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 SRPK3Q9UPE1 567 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 PCYT1BQ9Y5K3 369 aaPredicted RBP6.91□□□□□ -1.3
ATR-201ENST00000350721 CACNA1BQ00975 2339 aa6.91□□□□□ -1.3
ATR-201ENST00000350721 NFYBP25208 207 aa6.9□□□□□ -1.3
ATR-201ENST00000350721 AGBL4Q5VU57 503 aa6.9□□□□□ -1.3
ATR-201ENST00000350721 LAMTOR1Q6IAA8 161 aa6.9□□□□□ -1.3
ATR-201ENST00000350721 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms