RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 HOXD9P28356 352 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 IGFALSP35858 605 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 FHITP49789 147 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SIRPAP78324 504 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF616Q08AN1 781 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 TANGO2Q6ICL3 276 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 TMPRSS12Q86WS5 348 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SLC35G3Q8N808 338 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 LMNTD1Q8N9Z9 388 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 OR51L1Q8NGJ5 315 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SFXN5Q8TD22 340 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 TMEM255BQ8WV15 326 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 EXTL1Q92935 676 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 NEURL3Q96EH8 262 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SLC12A9Q9BXP2 914 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SLC17A9Q9BYT1 436 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 GNG8Q9UK08 70 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 VSIG4Q9Y279 399 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 TVP23AA6NH52 213 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ADRA2CP18825 462 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SNCAP37840 140 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SOX2P48431 317 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SULT1A2P50226 295 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 CEBPGP53567 150 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 EFEMP1Q12805 493 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SRSF5Q13243 272 aaKnown RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 PDE7AQ13946 482 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF705AQ6ZN79 300 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 CXorf40BQ96DE9 158 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 INTS14Q96SY0 518 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ACTR3CQ9C0K3 210 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 IL26Q9NPH9 171 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 MARCH5Q9NX47 278 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 DHRS7CA6NNS2 312 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF821O75541 412 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 NSA2O95478 260 aaKnown RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SELPP16109 830 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 TBPP20226 339 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZBTB25P24278 435 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ACRV1P26436 265 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 NAA10P41227 235 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 CDKN1BP46527 198 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 MANFP55145 182 aaKnown RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ERVFC1-1P60608 527 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SKP1P63208 163 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 IL13RA1P78552 427 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 PAX5Q02548 391 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 NFATC4Q14934 902 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 RAB35Q15286 201 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 FAM71E1Q6IPT2 247 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF563Q8TA94 476 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 MOAP1Q96BY2 351 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 GNRHR2Q96P88 292 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ALKBH3Q96Q83 286 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 NELFAQ9H3P2 528 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SERINC1Q9NRX5 453 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 SH2B3Q9UQQ2 575 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 PPIL1Q9Y3C6 166 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 TCRBV21S2A2A0A5A6 115 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 CDC14BO60729 498 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 CBR3O75828 277 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 SCGNO76038 276 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 CD82P27701 267 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 SLC37A1P57057 533 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 TSTA3Q13630 321 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 KIRREL2Q6UWL6 708 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF573Q86YE8 665 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 METTL27Q8N6F8 245 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ASB11Q8WXH4 323 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 POTEKPQ9BYX7 375 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 CBY3A6NI87 242 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 IFNL4K9M1U5 179 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 GRM6O15303 877 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF354AO60765 605 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 RPLP2P05387 115 aaKnown RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 RPS2P15880 293 aaKnown RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 PRSS3P35030 304 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 TAGLN2P37802 199 aaKnown RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 SLC6A9P48067 706 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 CCR4P51679 360 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ULK3Q6PHR2 472 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 LYG2Q86SG7 212 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 NXPE1Q8N323 547 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 OR51F2Q8NH61 342 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 FIBINQ8TAL6 211 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZG16BQ96DA0 208 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZMYND19Q96E35 227 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 SYT3Q9BQG1 590 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 GPR87Q9BY21 358 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 OR2AG1Q9H205 316 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZMAT3Q9HA38 289 aaKnown RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 TMED7Q9Y3B3 224 aa9.62□□□□□ -0.87
CAPN3-203ENST00000349748 PCYT1BQ9Y5K3 369 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF106Q9H2Y7 1883 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms