RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 H0YC42 278 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 ETV2O00321 342 aaPredicted RBP11.98□□□□□ -0.49
UBA3-201ENST00000349511 PLPP3O14495 311 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 ARPC3O15145 178 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 PIN1P1O15428 100 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 CBR3O75828 277 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 TRAPPC6AO75865 159 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 SLC22A5O76082 557 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 GDNFP39905 211 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 DIO1P49895 249 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 LGALS3BPQ08380 585 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 CLN3Q13286 438 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 CAMK2DQ13557 499 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 SGCBQ16585 318 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 MESTQ5EB52 335 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 HES5Q5TA89 166 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 RFPL4BQ6ZWI9 263 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 JAZF1Q86VZ6 243 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 ZNF680Q8NEM1 530 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 C5orf34Q96MH7 638 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 GPX7Q96SL4 187 aaPredicted RBP11.98□□□□□ -0.49
UBA3-201ENST00000349511 GFI1Q99684 422 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 HEXA-AS1Q9H8Q6 139 aa11.98□□□□□ -0.49
UBA3-201ENST00000349511 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
UBA3-201ENST00000349511 OR2M5A3KFT3 312 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 DCTN6O00399 190 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 ZNF208O43345 1280 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 DXOO77932 396 aaKnown RBP11.97□□□□□ -0.49
UBA3-201ENST00000349511 SRMP19623 302 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 SDHAP31040 664 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 CASRP41180 1078 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 TLE3Q04726 772 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 ACKR1Q16570 336 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 OTPQ5XKR4 325 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 LINGO2Q7L985 606 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 OR6K6Q8NGW6 343 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 OR56B4Q8NH76 319 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 CMTM3Q96MX0 182 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 FOXN4Q96NZ1 517 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 DDOQ99489 341 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 SLC25A18Q9H1K4 315 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 C20orf85Q9H1P6 137 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
UBA3-201ENST00000349511 A0A1B0GVI7 797 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 ACOD1A6NK06 481 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 ZNF879B4DU55 563 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 MS4A18H0YCH9 400 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 SSNA1O43805 119 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 HPXP02790 462 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 SPI1P17947 270 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 DLX5P56178 289 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 RTP5Q14D33 572 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 MS4A18Q3C1V0 323 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
UBA3-201ENST00000349511 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
UBA3-201ENST00000349511 IGF2-ASQ6U949 168 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 FGD2Q7Z6J4 655 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 OR8H3Q8N146 312 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 OR14L1PQ8NHC6 308 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 MFSD8Q8NHS3 518 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 GCDHQ92947 438 aaPredicted RBP11.96□□□□□ -0.49
UBA3-201ENST00000349511 ZBTB8AQ96BR9 441 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 NTNG2Q96CW9 530 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 NXPE2Q96DL1 559 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 SORCS2Q96PQ0 1159 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 FAM117AQ9C073 453 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 ACTR6Q9GZN1 396 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 NKIRAS2Q9NYR9 191 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 ABI3Q9P2A4 366 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 CSAG2Q9Y5P2 127 aa11.96□□□□□ -0.49
UBA3-201ENST00000349511 ATMQ13315 3056 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 LINC00862A6NCI5 91 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 ANKRD61A6NGH8 418 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 ZNF814B7Z6K7 855 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 PSMD9O00233 223 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 GMDSO60547 372 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 ICMTO60725 284 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 GPANK1O95872 356 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 CNR1P21554 472 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 DNASE1P24855 282 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 GDF1P27539 372 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 EIF1P41567 113 aaKnown RBP11.96□□□□□ -0.5
UBA3-201ENST00000349511 MAGEB1P43366 347 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 CCR9P51686 369 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 ZP1P60852 638 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 PUDPQ08623 228 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 WIPI1Q5MNZ9 446 aaPredicted RBP11.96□□□□□ -0.5
UBA3-201ENST00000349511 GPAT4Q86UL3 456 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 WDFY1Q8IWB7 410 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 CCDC28AQ8IWP9 274 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 SULF2Q8IWU5 870 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 PM20D2Q8IYS1 436 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.5
UBA3-201ENST00000349511 GTPBP8Q8N3Z3 284 aaPredicted RBP11.96□□□□□ -0.5
UBA3-201ENST00000349511 SYT4Q9H2B2 425 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 PLEKHA1Q9HB21 404 aa11.96□□□□□ -0.5
UBA3-201ENST00000349511 HRASLSQ9HDD0 168 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms