RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RBM34P42696 430 aaKnown RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 C9orf152Q5JTZ5 239 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 SLC35D3Q5M8T2 416 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 ZC3H10Q96K80 434 aaKnown RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 LRFN5Q96NI6 719 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 WDR77Q9BQA1 342 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF426Q9BUY5 554 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 SEC61A2Q9H9S3 476 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 CYTL1Q9NRR1 136 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 METTL1Q9UBP6 276 aaKnown RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 HEBP2Q9Y5Z4 205 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 TICRRQ7Z2Z1 1910 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 TRBV5-7A0A0A0MS05 114 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 C13orf42A0A1B0GVH6 325 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF736B4DX44 427 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 RNASEK-C17orf49H0YIS7 233 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 AGPAT2O15120 278 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 CYB5AP00167 134 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 NQO2P16083 231 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 TLX1P31314 330 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 GABRA3P34903 492 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 IL13RA1P78552 427 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 SSBP1Q04837 148 aaKnown RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 GPR18Q14330 331 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 LEG1Q6P5S2 330 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 FIGLAQ6QHK4 219 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 LYG2Q86SG7 212 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF561Q8N587 486 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 FAM3CQ92520 227 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 RRNAD1Q96FB5 475 aaKnown RBP16.82■□□□□ 0.28
SCARF1-202ENST00000348987 NMNAT2Q9BZQ4 307 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 PILRAQ9UKJ1 303 aa16.82■□□□□ 0.28
SCARF1-202ENST00000348987 CTSBP07858 339 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 CD14P08571 375 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF14P17017 642 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-202ENST00000348987 SKP1P63208 163 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 C3orf49Q96BT1 292 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 CHMP1AQ9HD42 196 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-202ENST00000348987 TMED7Q9Y3B3 224 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 TEX13DA0A0J9YY54 714 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-202ENST00000348987 LOC100289279A0A1B0GTE1 492 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 A0A1W2PQF6 199 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 OR4C45A6NMZ5 311 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 H0YGG7 62 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 WRBO00258 174 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 AGAP20933 346 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 CAV2P51636 162 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 ARF3P61204 181 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-202ENST00000348987 RAB11BQ15907 218 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 OR52W1Q6IF63 320 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 TMPPEQ6ZT21 453 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 PLPP7Q8NBV4 271 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 LPAR3Q9UBY5 353 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 CACNA1CQ13936 2221 aa16.81■□□□□ 0.28
SCARF1-202ENST00000348987 C9orf170A2RU37 121 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 C5orf51A6NDU8 294 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 C9JQL5 133 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR8U8P0C7N1 319 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 VAMP1P23763 118 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 PSMB6P28072 239 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 PPP1CAP62136 330 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 ALG11Q2TAA5 492 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 ITPRIPL2Q3MIP1 535 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR2B11Q5JQS5 317 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR10K2Q6IF99 312 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR4N2Q8NGD1 307 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR2G2Q8NGZ5 317 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 GPR148Q8TDV2 347 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 MRPL38Q96DV4 380 aaKnown RBP16.8■□□□□ 0.28
SCARF1-202ENST00000348987 BMFQ96LC9 184 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-202ENST00000348987 MICU1Q9BPX6 476 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 RPS10P5Q9NQ39 176 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 EML5Q05BV3 1969 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 HLA-GP17693 338 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 CDKN2AP42771 156 aaKnown RBP16.8■□□□□ 0.28
SCARF1-202ENST00000348987 EMDP50402 254 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 MGAT2Q10469 447 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF761Q86XN6 746 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-202ENST00000348987 WDSUB1Q8N9V3 476 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 MITD1Q8WV92 249 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 ISOC2Q96AB3 205 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 PHB2Q99623 299 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 COMMD4Q9H0A8 199 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 OR2S2Q9NQN1 319 aa16.8■□□□□ 0.28
SCARF1-202ENST00000348987 TVP23AA6NH52 213 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ELOA3DA6NLF2 546 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 CYR61O00622 381 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ABHD16AO95870 558 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 CRHP06850 196 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 RCC1P18754 421 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 CCKBRP32239 447 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 HGFACQ04756 655 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ELOCQ15369 112 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 PRICKLE4Q2TBC4 344 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ELOA3BQ3SY89 546 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 DPY19L2P2Q6ZN68 376 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 SLC25A42Q86VD7 318 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF595Q8IYB9 648 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms