RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 WACQ9BTA9 647 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 CAB39Q9Y376 341 aaPredicted RBP23.69■■□□□ 1.38
SSBP4-202ENST00000348495 WNT11O96014 354 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 MMP7P09237 267 aaPredicted RBP23.68■■□□□ 1.38
SSBP4-202ENST00000348495 EGR3Q06889 387 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 HIKESHIQ53FT3 197 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 KCTD8Q6ZWB6 473 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 SLC16A14Q7RTX9 510 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 OR10S1Q8NGN2 331 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 OR2AJ1Q8NGZ0 328 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 OR52N5Q8NH56 324 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 FGFBP3Q8TAT2 258 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 MND1Q9BWT6 205 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 TTTY10Q9BZA0 68 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 C1orf198Q9H425 327 aa23.68■■□□□ 1.38
SSBP4-202ENST00000348495 PNRC2Q9NPJ4 139 aaKnown RBP23.68■■□□□ 1.38
SSBP4-202ENST00000348495 HIVEP3Q5T1R4 2406 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 RER1O15258 196 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 RAD51DO75771 328 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 CHRNB4P30926 498 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 ROM1Q03395 351 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 DOC2BQ14184 412 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 TBRG1Q3YBR2 411 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 OR2G6Q5TZ20 316 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 STAC2Q6ZMT1 411 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 OR52N1Q8NH53 320 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 RNF133Q8WVZ7 376 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 ZNF503-AS2A6NEH8 195 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 MYL12BO14950 172 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 ACTA2P62736 377 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 ACTG2P63267 376 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 TSC22D1Q15714 1073 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 OR7E24Q6IFN5 339 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 MTFR2Q6P444 385 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 KLHL36Q8N4N3 616 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 GJC3Q8NFK1 279 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 OR8B4Q96RC9 309 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 ISG20L2Q9H9L3 353 aaKnown RBP23.67■■□□□ 1.38
SSBP4-202ENST00000348495 SCOCQ9UIL1 159 aa23.67■■□□□ 1.38
SSBP4-202ENST00000348495 CIB4A0PJX0 185 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 MAGEB4O15481 346 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-202ENST00000348495 PATE4P0C8F1 98 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 PSMB1P20618 241 aaKnown RBP23.66■■□□□ 1.38
SSBP4-202ENST00000348495 PCBD1P61457 104 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 EGFL6Q8IUX8 553 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 SYS1Q8N2H4 156 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 SNX33Q8WV41 574 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 ELOVL5Q9NYP7 299 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 MRM2Q9UI43 246 aaKnown RBP23.66■■□□□ 1.38
SSBP4-202ENST00000348495 ERRFI1Q9UJM3 462 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-202ENST00000348495 TIMM10BQ9Y5J6 103 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 FAM208BQ5VWN6 2430 aa23.66■■□□□ 1.38
SSBP4-202ENST00000348495 ABHD16AO95870 558 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 CLPTM1O96005 669 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 LCKP06239 509 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 HOXB1P14653 301 aaPredicted RBP23.65■■□□□ 1.38
SSBP4-202ENST00000348495 ZNF32P17041 273 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 WNT4P56705 351 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 SLC36A2Q495M3 483 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 UBE2UQ5VVX9 321 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 TMEM154Q6P9G4 183 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 KCTD18Q6PI47 426 aaPredicted RBP23.65■■□□□ 1.38
SSBP4-202ENST00000348495 RHOUQ7L0Q8 258 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 BHLHA15Q7RTS1 189 aaPredicted RBP23.65■■□□□ 1.38
SSBP4-202ENST00000348495 DPPA2Q7Z7J5 298 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 ASB5Q8WWX0 329 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 SLAMF6Q96DU3 332 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 OR5M11Q96RB7 305 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 KCNN2Q9H2S1 579 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 B3GNT2Q9NY97 397 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 SLCO1C1Q9NYB5 712 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 COQ3Q9NZJ6 369 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 CACNA1CQ13936 2221 aa23.65■■□□□ 1.38
SSBP4-202ENST00000348495 SULT1C4O75897 302 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 HLA-HP01893 362 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 OR12D2P58182 307 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 SCRN3Q0VDG4 424 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 SLC25A35Q3KQZ1 300 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 CCDC92Q53HC0 331 aaPredicted RBP23.64■■□□□ 1.38
SSBP4-202ENST00000348495 TMPRSS11AQ6ZMR5 421 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 CCDC36Q8IYA8 594 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 C17orf78Q8N4C9 275 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 LILRB4Q8NHJ6 448 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 MRPL48Q96GC5 212 aaKnown RBP23.64■■□□□ 1.38
SSBP4-202ENST00000348495 C4orf36Q96KX1 117 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 MYCBPQ99417 103 aaPredicted RBP23.64■■□□□ 1.38
SSBP4-202ENST00000348495 GALNT8Q9NY28 637 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 ZNF462Q96JM2 2506 aa23.64■■□□□ 1.38
SSBP4-202ENST00000348495 PSMD9O00233 223 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 TFAP2AP05549 437 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 JUNBP17275 347 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-202ENST00000348495 OPRL1P41146 370 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 PSG4Q00888 419 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 SPHARQ15513 63 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 TP53I3Q53FA7 332 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 LRRN1Q6UXK5 716 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 PLEKHG7Q6ZR37 379 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 KCTD20Q7Z5Y7 419 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 ZNF679Q8IYX0 411 aa23.64■■□□□ 1.37
SSBP4-202ENST00000348495 SPRYD4Q8WW59 207 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms