RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TMEM212A6NML5 194 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 NPIPB9F8W1W9 429 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 PPIHO43447 177 aaKnown RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 IFNA2P01563 188 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 HTR2CP28335 458 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CSNK1EP49674 416 aaKnown RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 RAB5CP51148 216 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 SCAND1P57086 179 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CEBPEQ15744 281 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 Q6ZRG5 221 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ZNF595Q8IYB9 648 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 OR51F2Q8NH61 342 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CD300LFQ8TDQ1 290 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 AMELYQ99218 206 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 RAB33BQ9H082 229 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 TAF9BQ9HBM6 251 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ZDHHC4Q9NPG8 344 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CACNA1IQ9P0X4 2223 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 H7C1Q1 480 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 SLC34A2O95436 690 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ABHD16AO95870 558 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 IFNA6P05013 189 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CD5P06127 495 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ELNP15502 786 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 S100A2P29034 98 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 KIR3DL2P43630 455 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 NDUFA6P56556 154 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 KIAA0141Q14154 515 aaPredicted RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 TRAPPC6BQ86SZ2 158 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 MARCH1Q8TCQ1 289 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ADAMTS17Q8TE56 1095 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 NMNAT2Q9BZQ4 307 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 NRSN2Q9GZP1 204 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 SPHK2Q9NRA0 654 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 KPTNQ9Y664 436 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 HLA-DQA2P01906 255 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 LRG1P02750 347 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 CPMP14384 443 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 PI3P19957 117 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 HRH1P35367 487 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 SPOCK1Q08629 439 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 FJX1Q86VR8 437 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 TCEAL8Q8IYN2 117 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 MCHR2Q969V1 340 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 MRGPRFQ96AM1 343 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 MARS2Q96GW9 593 aaKnown RBP13.84□□□□□ -0.19
LMNA-201ENST00000347559 C14orf144Q96I85 54 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 SMIM8Q96KF7 97 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 TRIM2Q9C040 744 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 AMDHD2Q9Y303 409 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 OR1A2Q9Y585 309 aa13.84□□□□□ -0.19
LMNA-201ENST00000347559 EFSO43281 561 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 ZNF432O94892 652 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 SOD2P04179 222 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 FCGR3AP08637 254 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 NDUFB7P17568 137 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 RPS10P46783 165 aaKnown RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 DVL1P1P54792 670 aaPredicted RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 PDZD11Q5EBL8 140 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 ZNF565Q8N9K5 539 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 SEMA6DQ8NFY4 1073 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 FAM46BQ96A09 425 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 SAT2Q96F10 170 aaPredicted RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 ZNF426Q9BUY5 554 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 SLC17A9Q9BYT1 436 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 SMIM3Q9BZL3 60 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 HCFC1R1Q9NWW0 138 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 TIMM10BQ9Y5J6 103 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 MRPS18BQ9Y676 258 aaKnown RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 A0A1B0GV50 99 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 AK1P00568 194 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 HLA-GP17693 338 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 TACR3P29371 465 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 CTXN1P60606 82 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 NNATQ16517 81 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 TAF8Q7Z7C8 310 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 OR4N2Q8NGD1 307 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 OR51A2Q8NGJ7 313 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 TEX101Q9BY14 249 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 EIF5A2Q9GZV4 153 aaKnown RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 TAS2R4Q9NYW5 299 aa13.83□□□□□ -0.2
LMNA-201ENST00000347559 C19orf53Q9UNZ5 99 aaPredicted RBP13.83□□□□□ -0.2
LMNA-201ENST00000347559 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
LMNA-201ENST00000347559 BRINP1O60477 761 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ADH1AP07327 375 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ITGA3P26006 1051 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 FAM53BQ14153 422 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 MEF2DQ14814 521 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ULK3Q6PHR2 472 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 C17orf99Q6UX52 265 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.82□□□□□ -0.2
LMNA-201ENST00000347559 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 OR52E1Q8NGJ3 308 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms