RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF66Q6ZN08 573 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 PARS2Q7L3T8 475 aaKnown RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 LILRA3Q8N6C8 439 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF485Q8NCK3 441 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 KLHDC9Q8NEP7 349 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 OR4F5Q8NH21 305 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 PIGCQ92535 297 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ISOC2Q96AB3 205 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ABHD1Q96SE0 405 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 LINC00597Q9H2U6 94 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 TOX4O94842 621 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 OPN1LWP04000 364 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ADRA2CP18825 462 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 DSC1Q08554 894 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CHAC2Q8WUX2 184 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF2Q9BSG1 426 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ABHD6Q9BV23 337 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ACRP10323 421 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 MELKQ14680 651 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF79Q15937 498 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 SLC48A1Q6P1K1 146 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ETFBKMTQ8IXQ9 262 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 MKXQ8IYA7 352 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 OR5L2Q8NGL0 311 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ARID1BQ8NFD5 2236 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF816-ZNF321PA0A0X1KG74 233 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CLN5O75503 358 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 C1QAP02745 245 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CST2P09228 141 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 RPA2P15927 270 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF542PQ5EBM4 170 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 OR8G2PQ6IF36 304 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 TMEFF1Q8IYR6 380 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF321PQ8N8H1 164 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 OR51A2Q8NGJ7 313 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 HAO2Q9NYQ3 351 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 NTMQ9P121 344 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 SLCO2B1O94956 709 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 NPSR1Q6W5P4 371 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 LRFN5Q96NI6 719 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 UCK1Q9HA47 277 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CHST11Q9NPF2 352 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 KCNG2Q9UJ96 466 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 HNF1AP20823 631 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 SSBP1Q04837 148 aaKnown RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CST6Q15828 149 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 MFSD9Q8NBP5 474 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CMBLQ96DG6 245 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 GMLQ99445 158 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 TINAGL1Q9GZM7 467 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-202ENST00000345356 GPR173Q9NS66 373 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 CHD4Q14839 1912 aa11.07□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 FTCDNL1E5RQL4 147 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 HSPB6O14558 160 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 FGF18O76093 207 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 THBS3P49746 956 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 TPPP2P59282 170 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 KIR2DS3Q14952 304 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 MPPED2Q15777 294 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 PSMF1Q92530 271 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF845Q96IR2 970 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 CCDC74BQ96LY2 380 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 NXF2Q9GZY0 626 aaKnown RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 J3QR89 54 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 KLK3P07288 261 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 SLC6A12P48065 614 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 PHF19Q5T6S3 580 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 DCXRQ7Z4W1 244 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 STT3BQ8TCJ2 826 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 REEP6Q96HR9 211 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 SLC17A9Q9BYT1 436 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 BARHL1Q9BZE3 327 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 FOXJ3Q9UPW0 622 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 MBTPS2O43462 519 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 XRCC2O43543 280 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 IGF2P01344 180 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ARG1P05089 322 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 IGFBP4P22692 258 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 CCDC187A0A096LP49 1063 aa11.06□□□□□ -0.64
COL12A1-202ENST00000345356 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-202ENST00000345356 SULT2B1O00204 365 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms