RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GLO1Q04760 184 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 PPP1R8Q12972 351 aaKnown RBP12.32□□□□□ -0.44
HMGN3-202ENST00000344726 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 PGBD2Q6P3X8 592 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 ADCK1Q86TW2 530 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-202ENST00000344726 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 ERMAPQ96PL5 475 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-202ENST00000344726 BTBD10Q9BSF8 475 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 RERGLQ9H628 205 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 ICMTO60725 284 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
HMGN3-202ENST00000344726 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 FAM157CP0CG43 387 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 HMGA2P52926 109 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
HMGN3-202ENST00000344726 VASH1Q7L8A9 365 aaPredicted RBP12.31□□□□□ -0.44
HMGN3-202ENST00000344726 GLB1L2Q8IW92 636 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 ARHGAP24Q8N264 748 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 ZNF540Q8NDQ6 660 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 OR4C15Q8NGM1 316 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 CLPTM1LQ96KA5 538 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 OR2J1Q9GZK6 312 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 POFUT1Q9H488 388 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 HINT3Q9NQE9 182 aaKnown RBP12.31□□□□□ -0.44
HMGN3-202ENST00000344726 VNN3Q9NY84 501 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 TAS2R1Q9NYW7 299 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
HMGN3-202ENST00000344726 DYSFO75923 2080 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 IGLV1-36A0A0B4J1U3 117 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 WNT9BO14905 357 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ARPC3O15145 178 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 SGCEO43556 437 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 DOK2O60496 412 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 RP2O75695 350 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 GAAP10253 952 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 COX5BP10606 129 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 HIST1H1CP16403 213 aaKnown RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 SLC6A6P31641 620 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 MMP15P51511 669 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 SELENOVP59797 346 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 PPP1CBP62140 327 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 CCL8P80075 99 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 MEP1BQ16820 701 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 CCDC92Q53HC0 331 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 MTX3Q5HYI7 312 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ZNF770Q6IQ21 691 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 LEG1Q6P5S2 330 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ZNF620Q6ZNG0 422 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 OR6V1Q8N148 313 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 OR4K13Q8NH42 304 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 SLC7A6Q92536 515 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 RDH5Q92781 318 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 NMNAT3Q96T66 252 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 WACQ9BTA9 647 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 IFT27Q9BW83 186 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 EGLN3Q9H6Z9 239 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 SLCO1C1Q9NYB5 712 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ASH2LQ9UBL3 628 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
HMGN3-202ENST00000344726 B9D1Q9UPM9 204 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
HMGN3-202ENST00000344726 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 KRT36O76013 467 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 TGFAP01135 160 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 ACHEP22303 614 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 IFNGR2P38484 337 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 HTR5AP47898 357 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
HMGN3-202ENST00000344726 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 AQP6Q13520 282 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 CCNIQ14094 377 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 ZNF718Q3SXZ3 478 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
HMGN3-202ENST00000344726 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms