RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 GPX8Q8TED1 209 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 FUBP3Q96I24 572 aaKnown RBP eCLIP3.25□□□□□ -1.89
SYNE1-201ENST00000341594 FIZ1Q96SL8 496 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 IMMP2LQ96T52 175 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 PCGF1Q9BSM1 259 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 WDR76Q9H967 626 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 PDE7BQ9NP56 450 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 MANBAO00462 879 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 ADH1BP00325 375 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 HSPB1P04792 205 aaKnown RBP3.25□□□□□ -1.89
SYNE1-201ENST00000341594 IL12BP29460 328 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 CDK6Q00534 326 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 LARS2Q15031 903 aaKnown RBP3.25□□□□□ -1.89
SYNE1-201ENST00000341594 NOTUMQ6P988 496 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 DPPA4Q7L190 304 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 CERS5Q8N5B7 392 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 UBQLN3Q9H347 655 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 GABRA3P34903 492 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 ADAM8P78325 824 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 PRR5P85299 388 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 HES1Q14469 280 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 FCRLAQ7L513 359 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 KLHL36Q8N4N3 616 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 L3MBTL4Q8NA19 623 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 SLC35F5Q8WV83 523 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 C11orf54Q9H0W9 315 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-201ENST00000341594 PTGES2Q9H7Z7 377 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 SEMA4GQ9NTN9 838 aa3.25□□□□□ -1.89
SYNE1-201ENST00000341594 PDE6DO43924 150 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IFNW1P05000 195 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SDC1P18827 310 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 HNRNPA2B1P22626 353 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 WNT4P56705 351 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ENTPD8Q5MY95 495 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ENPP7Q6UWV6 458 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 C3orf56Q8N813 242 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ARRDC4Q8NCT1 418 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SCAMP4Q969E2 229 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 KTI12Q96EK9 354 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RAB22AQ9UL26 194 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF587BE7ETH6 402 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RAD51DO75771 328 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 MANEAQ5SRI9 462 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 MRGPREQ86SM8 312 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR4L1Q8NH43 312 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SPACA9Q96E40 222 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 DPEP2Q9H4A9 486 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 LRP5LA4QPB2 252 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 KDELR3O43731 214 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 UCP2P55851 309 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SELENOWP63302 87 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RTL4Q6ZR62 310 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IGFBPL1Q8WX77 278 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 RNF125Q96EQ8 232 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 MAGT1Q9H0U3 335 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IL26Q9NPH9 171 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TNFRSF19Q9NS68 423 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CEP295Q9C0D2 2601 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SYT7O43581 403 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 POP4O95707 220 aaKnown RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TFP02787 698 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 EPXP11678 715 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TEAD2Q15562 447 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR51G2Q8NGK0 314 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ADAM29Q9UKF5 820 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PCDHB14Q9Y5E9 798 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 A8MXE2 369 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 LAMP1P11279 417 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ARRB2P32121 409 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CTXN3Q4LDR2 81 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PQLC3Q8N755 202 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 DTWD2Q8NBA8 298 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF738Q8NE65 137 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 THAP7Q9BT49 309 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 POMT2Q9UKY4 750 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR6C68A6NDL8 312 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 LYRM1O43325 122 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SLC35E2BP0CK96 405 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CD52P31358 61 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ACSM5Q6NUN0 579 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 Q6ZVH6 145 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 AMER3Q8N944 861 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 EMCNQ9ULC0 261 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IGLV3-22A0A075B6J6 115 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 TRAV9-1A0A075B6T8 112 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IFNA5P01569 189 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF7P17097 686 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-201ENST00000341594 FOXK2Q01167 660 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF77Q15935 545 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF440Q8IYI8 595 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SULT4A1Q9BR01 284 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 AMBRA1Q9C0C7 1298 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 PPP1R3EQ9H7J1 279 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 SH2B3Q9UQQ2 575 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 CELP19835 753 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 IQCJQ1A5X6 159 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR52M1Q8NGK5 317 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 OR6N1Q8NGY5 312 aa3.24□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF587Q96SQ5 575 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms