RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ERVS71-1P61550 626 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 PLP2Q04941 152 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 APOFQ13790 326 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 SPATA46Q5T0L3 261 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 FOXL2NBQ6ZUU3 175 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 DEPDC4Q8N2C3 294 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 OR6N2Q8NGY6 317 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 ZNF75AQ96N20 296 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CDH20Q9HBT6 801 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 DNAJC27Q9NZQ0 273 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 LHFPL6Q9Y693 200 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 COMMD3-BMI1R4GMX3 469 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CREBBPQ92793 2442 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 C12orf71A8MTZ7 269 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 SGCEO43556 437 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 SERPINA5P05154 406 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 DBHP09172 617 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 ZNF823P16415 610 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 STOMP27105 288 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
TUBD1-202ENST00000340993 SLX4IPQ5VYV7 408 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CDH24Q86UP0 819 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CCDC36Q8IYA8 594 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CCL19Q99731 98 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 TMEM204Q9BSN7 226 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 GABARAPL3Q9BY60 117 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CRNNQ9UBG3 495 aaPredicted RBP11.44□□□□□ -0.58
TUBD1-202ENST00000340993 TIMM10BQ9Y5J6 103 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 N6AMT1Q9Y5N5 214 aa11.44□□□□□ -0.58
TUBD1-202ENST00000340993 CELSR1Q9NYQ6 3014 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 LOC100509620A0A075B734 347 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 ZNF593O00488 134 aaPredicted RBP11.43□□□□□ -0.58
TUBD1-202ENST00000340993 CLIC3O95833 236 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 SOD3P08294 240 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 FMO3P31513 532 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 FABP6P51161 128 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 HCCSP53701 268 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 RAD23AP54725 363 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 GALK2Q01415 458 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 HGFACQ04756 655 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 AQP6Q13520 282 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 TBC1D28Q2M2D7 210 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 ALKBH6Q3KRA9 238 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 SNX18Q96RF0 628 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 PITX2Q99697 317 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 NMNAT2Q9BZQ4 307 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 USE1Q9NZ43 259 aa11.43□□□□□ -0.58
TUBD1-202ENST00000340993 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
TUBD1-202ENST00000340993 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 CDKN1AP38936 164 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 GDI2P50395 445 aaKnown RBP11.42□□□□□ -0.58
TUBD1-202ENST00000340993 SLC25A1P53007 311 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 PCBD1P61457 104 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 CCDC92Q53HC0 331 aaPredicted RBP11.42□□□□□ -0.58
TUBD1-202ENST00000340993 C12orf73Q69YU5 71 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
TUBD1-202ENST00000340993 SHFQ7M4L6 423 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 CYGBQ8WWM9 190 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 KCNG2Q9UJ96 466 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 GRIP1Q9Y3R0 1128 aa11.42□□□□□ -0.58
TUBD1-202ENST00000340993 PSMD9O00233 223 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 LCKP06239 509 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 GSTT1P30711 240 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 THBS4P35443 961 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 GGT2P36268 569 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 PRSS12P56730 875 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 SCRN3Q0VDG4 424 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 LINC01590Q5TEZ4 76 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 SLC18B1Q6NT16 456 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 PAMR1Q6UXH9 720 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 DPY19L4Q7Z388 723 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 DCXRQ7Z4W1 244 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ALDH16A1Q8IZ83 802 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ZNF101Q8IZC7 436 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 INTS14Q96SY0 518 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 SYT3Q9BQG1 590 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 CA10Q9NS85 328 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 GMPPBQ9Y5P6 360 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
TUBD1-202ENST00000340993 CCDC182A6NF36 153 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 F5H5K5 113 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 GLCEO94923 617 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 WNT5AP41221 380 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ENTPD1P49961 510 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 LSM6P62312 80 aaKnown RBP11.41□□□□□ -0.58
TUBD1-202ENST00000340993 EIF2B1Q14232 305 aaKnown RBP11.41□□□□□ -0.58
TUBD1-202ENST00000340993 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 LRP11Q86VZ4 500 aa11.41□□□□□ -0.58
TUBD1-202ENST00000340993 ABHD4Q8TB40 342 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms