RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PTPMT1Q8WUK0 201 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 C5orf34Q96MH7 638 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MED29Q9NX70 200 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 UPB1Q9UBR1 384 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 CA14Q9ULX7 337 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF432O94892 652 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 PI3P19957 117 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ACTBP60709 375 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ACTG1P63261 375 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MC2RQ01718 297 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 DHRS2Q13268 280 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 Q6ZS52 159 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MAMDC2Q7Z304 686 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF440Q8IYI8 595 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF679Q8IYX0 411 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 EXD3Q8N9H8 876 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 CLEC1AQ8NC01 280 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 FGGYQ96C11 551 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 KLHDC7BQ96G42 594 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 TMEM269A0A1B0GVZ9 245 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 FAM74A7A6NL05 159 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 RORAP35398 523 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 RABIFP47224 123 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 INSM1Q01101 510 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 PMPCAQ10713 525 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 FZD2Q14332 565 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 FAM74A3Q4VXF1 159 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 LHFPL5Q8TAF8 219 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 SEC61A2Q9H9S3 476 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 EXOSC3Q9NQT5 275 aaKnown RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 PLCL2Q9UPR0 1127 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 HRH3Q9Y5N1 445 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MUC22E2RYF6 1773 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-201ENST00000340437 PRSS37A4D1T9 235 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 ICAM2P13598 275 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 PRKXP51817 358 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 FUT7Q11130 342 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 RNASE10Q5GAN6 216 aaKnown RBP12.94□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF101Q8IZC7 436 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 ASB5Q8WWX0 329 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 MESP1Q9BRJ9 268 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 RABL2AQ9UBK7 228 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-201ENST00000340437 MKL2Q9ULH7 1088 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 RABL2BQ9UNT1 228 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 POLR1DQ9Y2S0 133 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TRBV5-7A0A0A0MS05 114 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 IFNA6P05013 189 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 CD1AP06126 327 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 IL13RA1P78552 427 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 ATPAF1Q5TC12 328 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-201ENST00000340437 RAB12Q6IQ22 244 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TRAPPC6BQ86SZ2 158 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 OR5M9Q8NGP3 310 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 SLC19A3Q9BZV2 496 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 OR2S2Q9NQN1 319 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 SLC39A1Q9NY26 324 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 CD207Q9UJ71 328 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 LOC107986453A0A1B0GWG9 222 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TRIM77I1YAP6 450 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 B3GALNT1O75752 331 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 PMP2P02689 132 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 GNB3P16520 340 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 PRKACAP17612 351 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 EGR3Q06889 387 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 FAM122CQ6P4D5 195 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 COX15Q7KZN9 410 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF248Q8NDW4 579 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 WBP1Q96G27 269 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 NPAS1Q99742 590 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 DPYSL5Q9BPU6 564 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 SELENOIQ9C0D9 397 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 GMEB2Q9UKD1 530 aa12.94□□□□□ -0.34
CPSF7-201ENST00000340437 TMED7-TICAM2A0A0A6YYA0 188 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 SLC37A1P57057 533 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 RPL27P61353 136 aaKnown RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 YPEL5P62699 121 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF273Q14593 569 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 PRTGQ2VWP7 1150 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 ASPHD2Q6ICH7 369 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 OR4D6Q8NGJ1 314 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 MCHR2Q969V1 340 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 CPNE2Q96FN4 548 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 SHARPINQ9H0F6 387 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 EPHA6Q9UF33 1036 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms