RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 SDCBPO00560 298 aaPredicted RBP13.29□□□□□ -0.28
RET-201ENST00000340058 MAP2K6P52564 334 aa13.29□□□□□ -0.28
RET-201ENST00000340058 GUCA2AQ02747 115 aa13.29□□□□□ -0.28
RET-201ENST00000340058 CDK10Q15131 360 aa13.29□□□□□ -0.28
RET-201ENST00000340058 FAM76BQ5HYJ3 339 aa13.29□□□□□ -0.28
RET-201ENST00000340058 STX12Q86Y82 276 aa13.29□□□□□ -0.28
RET-201ENST00000340058 ZNF454Q8N9F8 522 aa13.29□□□□□ -0.28
RET-201ENST00000340058 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
RET-201ENST00000340058 DDOQ99489 341 aa13.29□□□□□ -0.28
RET-201ENST00000340058 TXNIPQ9H3M7 391 aa13.29□□□□□ -0.28
RET-201ENST00000340058 EVA1AQ9H8M9 152 aa13.29□□□□□ -0.28
RET-201ENST00000340058 SLCO1B1Q9Y6L6 691 aa13.29□□□□□ -0.28
RET-201ENST00000340058 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
RET-201ENST00000340058 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
RET-201ENST00000340058 NAP1L6A6NFF2 107 aa13.29□□□□□ -0.28
RET-201ENST00000340058 UBE2IP63279 158 aaKnown RBP13.29□□□□□ -0.28
RET-201ENST00000340058 NPSR1Q6W5P4 371 aa13.29□□□□□ -0.28
RET-201ENST00000340058 CADM4Q8NFZ8 388 aa13.29□□□□□ -0.28
RET-201ENST00000340058 VSTM2LQ96N03 204 aa13.29□□□□□ -0.28
RET-201ENST00000340058 CES1P1Q9UKY3 287 aa13.29□□□□□ -0.28
RET-201ENST00000340058 SNRNP200O75643 2136 aaKnown RBP13.29□□□□□ -0.28
RET-201ENST00000340058 CX3CR1P49238 355 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MYBPHQ13203 477 aa13.28□□□□□ -0.28
RET-201ENST00000340058 RBM39Q14498 530 aaKnown RBP13.28□□□□□ -0.28
RET-201ENST00000340058 EBPQ15125 230 aaKnown RBP13.28□□□□□ -0.28
RET-201ENST00000340058 WIPI1Q5MNZ9 446 aaPredicted RBP13.28□□□□□ -0.28
RET-201ENST00000340058 FIP1L1Q6UN15 594 aaKnown RBP13.28□□□□□ -0.28
RET-201ENST00000340058 STAC2Q6ZMT1 411 aa13.28□□□□□ -0.28
RET-201ENST00000340058 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
RET-201ENST00000340058 ZNF546Q86UE3 836 aa13.28□□□□□ -0.28
RET-201ENST00000340058 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TXNDC15Q96J42 360 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MNTQ99583 582 aa13.28□□□□□ -0.28
RET-201ENST00000340058 PLSCR3Q9NRY6 295 aa13.28□□□□□ -0.28
RET-201ENST00000340058 DUSP13Q9UII6 198 aa13.28□□□□□ -0.28
RET-201ENST00000340058 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
RET-201ENST00000340058 PIGLQ9Y2B2 252 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TNFSF11O14788 317 aa13.28□□□□□ -0.28
RET-201ENST00000340058 STK17BO94768 372 aa13.28□□□□□ -0.28
RET-201ENST00000340058 B4GALT1P15291 398 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TAS2R20P59543 309 aa13.28□□□□□ -0.28
RET-201ENST00000340058 RAB2AP61019 212 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MKXQ8IYA7 352 aa13.28□□□□□ -0.28
RET-201ENST00000340058 OR5AS1Q8N127 324 aa13.28□□□□□ -0.28
RET-201ENST00000340058 HAVCR2Q8TDQ0 301 aa13.28□□□□□ -0.28
RET-201ENST00000340058 FCRL1Q96LA6 429 aa13.28□□□□□ -0.28
RET-201ENST00000340058 FTCDNL1E5RQL4 147 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TNFSF15O95150 251 aa13.28□□□□□ -0.28
RET-201ENST00000340058 PATE4P0C8F1 98 aa13.28□□□□□ -0.28
RET-201ENST00000340058 EPXP11678 715 aa13.28□□□□□ -0.28
RET-201ENST00000340058 OPRM1P35372 400 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MRPS10P82664 201 aaKnown RBP13.28□□□□□ -0.28
RET-201ENST00000340058 B3GNTL1Q67FW5 361 aaPredicted RBP13.28□□□□□ -0.28
RET-201ENST00000340058 VWCEQ96DN2 955 aa13.28□□□□□ -0.28
RET-201ENST00000340058 SPACA9Q96E40 222 aaPredicted RBP13.28□□□□□ -0.28
RET-201ENST00000340058 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
RET-201ENST00000340058 DNTTIP1Q9H147 329 aa13.28□□□□□ -0.28
RET-201ENST00000340058 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
RET-201ENST00000340058 FBXO24O75426 580 aa13.28□□□□□ -0.28
RET-201ENST00000340058 KIR2DL3P43628 341 aa13.28□□□□□ -0.28
RET-201ENST00000340058 GNMTQ14749 295 aa13.28□□□□□ -0.28
RET-201ENST00000340058 SLC17A1Q14916 467 aa13.28□□□□□ -0.28
RET-201ENST00000340058 TRILQ7L0X0 811 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MAML2Q8IZL2 1156 aaPredicted RBP13.28□□□□□ -0.28
RET-201ENST00000340058 MFSD4AQ8N468 514 aa13.28□□□□□ -0.28
RET-201ENST00000340058 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
RET-201ENST00000340058 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
RET-201ENST00000340058 MRI1Q9BV20 369 aa13.28□□□□□ -0.28
RET-201ENST00000340058 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
RET-201ENST00000340058 ZNF175Q9Y473 711 aa13.28□□□□□ -0.28
RET-201ENST00000340058 LOC100289279A0A1B0GTE1 492 aa13.27□□□□□ -0.28
RET-201ENST00000340058 NPIPB8E9PQR5 432 aa13.27□□□□□ -0.28
RET-201ENST00000340058 EFSO43281 561 aa13.27□□□□□ -0.28
RET-201ENST00000340058 CT45A8P0DMV1 189 aa13.27□□□□□ -0.28
RET-201ENST00000340058 CT45A9P0DMV2 189 aa13.27□□□□□ -0.28
RET-201ENST00000340058 CTLA4P16410 223 aa13.27□□□□□ -0.28
RET-201ENST00000340058 EPHA8P29322 1005 aaPredicted RBP13.27□□□□□ -0.28
RET-201ENST00000340058 CCR9P51686 369 aa13.27□□□□□ -0.28
RET-201ENST00000340058 TGFBR3Q03167 851 aa13.27□□□□□ -0.28
RET-201ENST00000340058 EXT1Q16394 746 aa13.27□□□□□ -0.28
RET-201ENST00000340058 C2orf76Q3KRA6 126 aa13.27□□□□□ -0.28
RET-201ENST00000340058 CT45A2Q5DJT8 189 aa13.27□□□□□ -0.28
RET-201ENST00000340058 OR6M1Q8NGM8 313 aa13.27□□□□□ -0.28
RET-201ENST00000340058 AKR7LQ8NHP1 331 aa13.27□□□□□ -0.28
RET-201ENST00000340058 C10orf90Q96M02 699 aa13.27□□□□□ -0.28
RET-201ENST00000340058 PRRT1Q99946 306 aa13.27□□□□□ -0.28
RET-201ENST00000340058 ASF1BQ9NVP2 202 aa13.27□□□□□ -0.28
RET-201ENST00000340058 ANKRD30BLA7E2S9 258 aa13.27□□□□□ -0.29
RET-201ENST00000340058 SGCEO43556 437 aa13.27□□□□□ -0.29
RET-201ENST00000340058 SSX5O60225 188 aa13.27□□□□□ -0.29
RET-201ENST00000340058 EIF1BO60739 113 aaKnown RBP13.27□□□□□ -0.29
RET-201ENST00000340058 WNT1P04628 370 aa13.27□□□□□ -0.29
RET-201ENST00000340058 GPR3P46089 330 aa13.27□□□□□ -0.29
RET-201ENST00000340058 EMP3P54852 163 aa13.27□□□□□ -0.29
RET-201ENST00000340058 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
RET-201ENST00000340058 BCL2A1Q16548 175 aa13.27□□□□□ -0.29
RET-201ENST00000340058 ZNF585AQ6P3V2 769 aa13.27□□□□□ -0.29
RET-201ENST00000340058 C5orf46Q6UWT4 87 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms