RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SSX5O60225 188 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 FADS1O60427 444 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 KCNJ13O60928 360 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 WISP1O95388 367 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 PNMTP11086 282 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 TSFMP43897 325 aaKnown RBP10.78□□□□□ -0.68
USP1-201ENST00000339950 KIAA0895LQ68EN5 471 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 FAM57BQ71RH2 274 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 TRAPPC6BQ86SZ2 158 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ZNF595Q8IYB9 648 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 DND1Q8IYX4 353 aaKnown RBP10.78□□□□□ -0.68
USP1-201ENST00000339950 TMEM156Q8N614 296 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 OR14A16Q8NHC5 309 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 CRB3Q9BUF7 120 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ABHD6Q9BV23 337 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 POTEKPQ9BYX7 375 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 CHRNA9Q9UGM1 479 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.78□□□□□ -0.68
USP1-201ENST00000339950 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.78□□□□□ -0.68
USP1-201ENST00000339950 PTP4A3O75365 173 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 WDPCPO95876 746 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GLAP06280 429 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 AKAIN1P0CW23 69 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 FOLR1P15328 257 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ADRA2CP18825 462 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 SERPINA2P20848 420 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GABRR1P24046 479 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 MESTQ5EB52 335 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 SEZ6L2Q6UXD5 910 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GSG1LQ6UXU4 331 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 PRSS42Q7Z5A4 293 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 CMIPQ8IY22 773 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 FAM181AQ8N9Y4 354 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GHITMQ9H3K2 345 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 SHANK1Q9Y566 2161 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 LOC107986453A0A1B0GWG9 222 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GPRIN2O60269 458 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 MPC2O95563 127 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ABOP16442 354 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 CAPZA1P52907 286 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 EPHA4P54764 986 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 MFGE8Q08431 387 aaPredicted RBP10.78□□□□□ -0.68
USP1-201ENST00000339950 C2orf68Q2NKX9 166 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 OR1J2Q8NGS2 313 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ELSPBP1Q96BH3 223 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 NIT2Q9NQR4 276 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 TRAV20A0A0B4J274 112 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 NXPH3O95157 252 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 RRASP10301 218 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 THBS2P35442 1172 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 DLSTP36957 453 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 ZNF41P51814 821 aaPredicted RBP10.77□□□□□ -0.68
USP1-201ENST00000339950 C1orf140Q5VVS0 124 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 OR11G2Q8NGC1 345 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 OR51E1Q8TCB6 317 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 NT5CQ8TCD5 201 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 PIGTQ969N2 578 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 ZBTB8AQ96BR9 441 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 ZFP64Q9NPA5 681 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 HHLA2Q9UM44 414 aa10.77□□□□□ -0.68
USP1-201ENST00000339950 TEX13DA0A0J9YY54 714 aaPredicted RBP10.77□□□□□ -0.69
USP1-201ENST00000339950 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 HSPB6O14558 160 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 GDF9O60383 454 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 ZNF254O75437 659 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 PNPP00491 289 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 HLA-DQB1P01920 261 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 TPOP07202 933 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 RBM39Q14498 530 aaKnown RBP10.77□□□□□ -0.69
USP1-201ENST00000339950 BAIAP2L2Q6UXY1 529 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 Q7L0L9 218 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 DCUN1D4Q92564 292 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 SLC25A38Q96DW6 304 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 KCNJ15Q99712 375 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 DEFB126Q9BYW3 111 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 SDHAF3Q9NRP4 125 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 ASH2LQ9UBL3 628 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 POMT2Q9UKY4 750 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 FOXJ3Q9UPW0 622 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 A0A087WV62 115 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 A0A0A6YYH2 397 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 A6NJ64 397 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 MMP15P51511 669 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 EMP2P54851 167 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 GPR85P60893 370 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 SRYQ05066 204 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 ZNF616Q08AN1 781 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 RBMS2Q15434 407 aaKnown RBP10.77□□□□□ -0.69
USP1-201ENST00000339950 ANGPTL5Q86XS5 388 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 SCMH1Q96GD3 660 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 ZC3HAV1LQ96H79 300 aaKnown RBP10.77□□□□□ -0.69
USP1-201ENST00000339950 ZNF75AQ96N20 296 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 OR6C1Q96RD1 312 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 NPAS1Q99742 590 aa10.77□□□□□ -0.69
USP1-201ENST00000339950 AKAP6Q13023 2319 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms