RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 OR7A17O14581 309 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SEMA7AO75326 666 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 EPXP11678 715 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PRKACAP17612 351 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 EDNRAP25101 427 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PTGER4P35408 488 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C21orf58P58505 322 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SNRPGP62308 76 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PPIAP62937 165 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR5I1Q13606 314 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SMUG1Q53HV7 270 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NXNL2Q5VZ03 156 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MEX3BQ6ZN04 569 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 IRF2BP1Q8IU81 584 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RCBTB1Q8NDN9 531 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR8U1Q8NH10 309 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ASB16Q96NS5 453 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ARPC5LQ9BPX5 153 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SUCNR1Q9BXA5 334 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C1QTNF2Q9BXJ5 285 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TXLNGYQ9BZA5 131 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RHOFQ9HBH0 211 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NDUFB11Q9NX14 153 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CD300LBA8K4G0 201 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 EMP3P54852 163 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MC2RQ01718 297 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NHLH1Q02575 133 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CYBRD1Q53TN4 286 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NADSYN1Q6IA69 706 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF425Q6IV72 752 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TRILQ7L0X0 811 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF627Q7L945 461 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CSNK1A1LQ8N752 337 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR51F2Q8NH61 342 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FANK1Q8TC84 345 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PHOSPHO1Q8TCT1 267 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ALG3Q92685 438 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 WDR77Q9BQA1 342 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TAAR2Q9P1P5 351 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 KIAA1456Q9P272 454 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF223Q9UK11 482 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SDK2Q58EX2 2172 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 A0A0J9YY10 115 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ACAA1P09110 424 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 DPP4P27487 766 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 IL1R2P27930 398 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CA5AP35218 305 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OPRM1P35372 400 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OPRL1P41146 370 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MS4A2Q01362 244 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PLCXD2Q0VAA5 305 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ASAH1Q13510 395 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HNRNPA1L2Q32P51 320 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SLC36A2Q495M3 483 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GALNTL5Q7Z4T8 443 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MARCH9Q86YJ5 346 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CPOQ8IVL8 374 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 APCDD1Q8J025 514 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OLIG1Q8TAK6 271 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RAB8BQ92930 207 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ESAMQ96AP7 390 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SGCZQ96LD1 299 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 IGKV6-21A0A0C4DH24 114 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ERI3O43414 337 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TIMM8AO60220 97 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ARSAP15289 507 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ARSBP15848 533 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CD80P33681 288 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CSNK1G2P78368 415 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HSF1Q00613 529 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SSPNQ14714 243 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C9orf152Q5JTZ5 239 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NUFIP2Q7Z417 695 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 WFDC8Q8IUA0 241 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FADS6Q8N9I5 356 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR13C4Q8NGS5 318 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PSMF1Q92530 271 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 UTP4Q969X6 686 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 BSCL2Q96G97 398 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PMCHL2Q9BQD1 86 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MENTQ9BUN1 341 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SALL4Q9UJQ4 1053 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RAB22AQ9UL26 194 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CLEC4EQ9ULY5 219 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 WASHC3Q9Y3C0 194 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1B0GV72 72 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SPINT2O43291 252 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CSTAP01040 98 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NQO2P16083 231 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 NAGAP17050 411 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PEX2P28328 305 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PRDX3P30048 256 aaKnown RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CSNK1A1P48729 337 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SUMO3P55854 103 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SEMA3BQ13214 749 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C6orf136Q5SQH8 315 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 STEAP3Q658P3 488 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM150AQ86TG1 271 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FAM58AQ8N1B3 248 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms