RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GPR137CQ8N3F9 429 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 OR13C8Q8NGS7 320 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SCAMP4Q969E2 229 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 MUCL1Q96DR8 90 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ARHGDIGQ99819 225 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 FNDC11Q9BVV2 318 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 RPS10P5Q9NQ39 176 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SIRT7Q9NRC8 400 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 FAM212BQ9NTI7 297 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 FBXL21Q9UKT6 434 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 OTOGLQ3ZCN5 2332 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 IGSF10Q6WRI0 2623 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 MGAT4DA6NG13 374 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF726A6NNF4 738 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DLEU1O43261 78 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM127O75204 238 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 LEFTY1O75610 366 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ZIC2O95409 532 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 MBP02144 154 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CD3DP04234 171 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 RLN1P04808 185 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CHRM4P08173 479 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 IL3P08700 152 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CXCL1P09341 107 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 RAB40ALP0C0E4 278 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 S1PR1P21453 382 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 PBLDP30039 288 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 GNG10P50151 68 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DVL1P1P54792 670 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 RSU1Q15404 277 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CCSMST1Q4G0I0 132 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF385CQ66K41 422 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 LPCAT3Q6P1A2 487 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 HMGN2P46Q86SG4 172 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 THOC6Q86W42 341 aaKnown RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DND1Q8IYX4 353 aaKnown RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF614Q8N883 585 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 AVL9Q8NBF6 648 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 OR2AP1Q8NGE2 309 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 TNFAIP8L1Q8WVP5 186 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 RAB40AQ8WXH6 277 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 MED8Q96G25 268 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 LOXL4Q96JB6 756 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 NDC1Q9BTX1 674 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 NOX4Q9NPH5 578 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 HAO2Q9NYQ3 351 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SLC23A2Q9UGH3 650 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 PI4KAP42356 2102 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DAPL1A0PJW8 107 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 PRR32B1ATL7 298 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 F5H0A9 414 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 H7BY64 318 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 OR8U9P0C7N5 309 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CALCBP10092 127 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 FUT1P19526 365 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 G0S2P27469 103 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SERPINA4P29622 427 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CD80P33681 288 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 THBS4P35443 961 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 PPICP45877 212 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 TDGF1P3P51864 188 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 EFNB2P52799 333 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 TAS2R43P59537 309 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SNRPD1P62314 119 aaKnown RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 PDGFRLQ15198 375 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 KRBOX4Q5JUW0 171 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CDC73Q6P1J9 531 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 C22orf39Q6P5X5 142 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 CRTC1Q6UUV9 634 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 LCTLQ6UWM7 567 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DCAF4L2Q8NA75 395 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 OR8U1Q8NH10 309 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 POC1BQ8TC44 478 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ABHD5Q8WTS1 349 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 MR1Q95460 341 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 WDR34Q96EX3 536 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SEC22AQ96IW7 307 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 GNRHR2Q96P88 292 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 HRH4Q9H3N8 390 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ASB8Q9H765 288 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 FN3KRPQ9HA64 309 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 BCO1Q9HAY6 547 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 C19orf12Q9NSK7 152 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 DKK4Q9UBT3 224 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF223Q9UK11 482 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 NTNG1Q9Y2I2 539 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 HS3ST3B1Q9Y662 390 aa5.03□□□□□ -1.6
CSDE1-202ENST00000339438 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-202ENST00000339438 SDK2Q58EX2 2172 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 C9J4A7 227 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PSMD9O00233 223 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 C8GP07360 202 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TPT1P13693 172 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TEAD1P28347 426 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 APLNRP35414 380 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TAS2R50P59544 299 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RNASE10Q5GAN6 216 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ENPP7Q6UWV6 458 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SLCO4C1Q6ZQN7 724 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 GID4Q8IVV7 300 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms