RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 CNTNAP3BQ96NU0 1288 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 LINC01553A4QN01 128 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 SYT7O43581 403 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF205O95201 554 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 NFYBP25208 207 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 RAB38P57729 211 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 ALG11Q2TAA5 492 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 FAM109BQ6ICB4 259 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 NUBPLQ8TB37 319 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 ANKRD9Q96BM1 317 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 TSPAN32Q96QS1 320 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 CST11Q9H112 138 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 SLC22A11Q9NSA0 550 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 A0A0A6YYH2 397 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 A6NJ64 397 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 G3V3Q6 166 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 ADAP1O75689 374 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 PMS2P2O95744 297 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 PNPP00491 289 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 KCNJ3P48549 501 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 LMX1AQ8TE12 382 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.36
PCDH8-201ENST00000338862 IL23AQ9NPF7 189 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 HHLA2Q9UM44 414 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 ETV7Q9Y603 341 aa12.77□□□□□ -0.36
PCDH8-201ENST00000338862 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 H0YIG0 161 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 CYR61O00622 381 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 SGCEO43556 437 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 CRTAPO75718 401 aaPredicted RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 NKX2-2O95096 273 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 HNRNPA2B1P22626 353 aaKnown RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 MFGE8Q08431 387 aaPredicted RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF74Q16587 644 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 MESTQ5EB52 335 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 ELFN2Q5R3F8 820 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 SVBPQ8N300 66 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 OR52H1Q8NGJ2 320 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 OR6N1Q8NGY5 312 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 HAO2Q9NYQ3 351 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 LOC107986453A0A1B0GWG9 222 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 RFPL4AA6NLU0 287 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 RFPL4AL1F8VTS6 287 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 WNT11O96014 354 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 IL5P05113 134 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 EMP2P54851 167 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 PRSS12P56730 875 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 TOMM40LQ969M1 308 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 ARL11Q969Q4 196 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 PELOQ9BRX2 385 aaKnown RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 EIF5A2Q9GZV4 153 aaKnown RBP12.77□□□□□ -0.37
PCDH8-201ENST00000338862 WDR13Q9H1Z4 485 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 GAREM1Q9H706 876 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 RHBDD3Q9Y3P4 386 aa12.77□□□□□ -0.37
PCDH8-201ENST00000338862 A0A0D9SG52 128 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ICOSLGO75144 302 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 MED6O75586 246 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 THEGLP0DJG4 465 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 CD80P33681 288 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF704Q6ZNC4 412 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 MAMDC2Q7Z304 686 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 LDAHQ9H6V9 325 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 MMP25Q9NPA2 562 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 EMC3Q9P0I2 261 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 CYB5R1Q9UHQ9 305 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 CPN1P15169 458 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 AMY2BP19961 511 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 COL9A1P20849 921 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 CLDN6P56747 220 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 VWA2Q5GFL6 755 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ABHD12BQ7Z5M8 362 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 BAHD1Q8TBE0 780 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 C4orf45Q96LM5 186 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF587Q96SQ5 575 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ABHD6Q9BV23 337 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 SARGQ9BW04 601 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 KNTC1P50748 2209 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 PNMTP11086 282 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 CTLA4P16410 223 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 MGMTP16455 207 aa12.76□□□□□ -0.37
PCDH8-201ENST00000338862 ZNF14P17017 642 aaPredicted RBP12.76□□□□□ -0.37
PCDH8-201ENST00000338862 GLO1Q04760 184 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms