RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 WARS2Q9UGM6 360 aaKnown RBP13.36□□□□□ -0.27
SEC13-201ENST00000337354 COMMD3-BMI1R4GMX3 469 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 HSPE1-MOB4S4R3N1 261 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 ZNF593O00488 134 aaPredicted RBP13.35□□□□□ -0.27
SEC13-201ENST00000337354 SGCEO43556 437 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 CECR9P0C854 216 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 LOXP28300 417 aaPredicted RBP13.35□□□□□ -0.27
SEC13-201ENST00000337354 HTR1FP30939 366 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 CAPGP40121 348 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 NAAAQ02083 359 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 SLC18B1Q6NT16 456 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.35□□□□□ -0.27
SEC13-201ENST00000337354 ZNF584Q8IVC4 421 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 SETD9Q8NE22 299 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 CYGBQ8WWM9 190 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 UBE2FQ969M7 185 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 ZMYND19Q96E35 227 aaPredicted RBP13.35□□□□□ -0.27
SEC13-201ENST00000337354 WDR76Q9H967 626 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 PLEK2Q9NYT0 353 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 ATPIF1Q9UII2 106 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEC13-201ENST00000337354 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 LHFPL6Q9Y693 200 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 NBPF19A0A087WUL8 3843 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 CENPEQ02224 2701 aa13.35□□□□□ -0.27
SEC13-201ENST00000337354 M0R129 80 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 ABCD4O14678 606 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 RER1O15258 196 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 STOMP27105 288 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 APLNRP35414 380 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 CDH11P55287 796 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 GGTLC2Q14390 218 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 ZNF691Q5VV52 312 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 ADAM5Q6NVV9 412 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 RHOUQ7L0Q8 258 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 BCDIN3DQ7Z5W3 292 aaKnown RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 ENTHD1Q8IYW4 607 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 CPEB3Q8NE35 698 aaKnown RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 SLC30A7Q8NEW0 376 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 IPCEF1Q8WWN9 437 aaPredicted RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 ZNF582Q96NG8 517 aaPredicted RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 HDHD2Q9H0R4 259 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 WNT5BQ9H1J7 359 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 CLEC4MQ9H2X3 399 aaPredicted RBP13.34□□□□□ -0.27
SEC13-201ENST00000337354 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
SEC13-201ENST00000337354 CCDC182A6NF36 153 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 CELA3BP08861 270 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 SPARCP09486 303 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 ZNF35P13682 527 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 GABRB1P18505 474 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 VHLP40337 213 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 HSPA13P48723 471 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 GDI2P50395 445 aaKnown RBP13.33□□□□□ -0.27
SEC13-201ENST00000337354 POU4F2Q12837 409 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 ECH1Q13011 328 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 RAB35Q15286 201 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 CCDC92Q53HC0 331 aaPredicted RBP13.33□□□□□ -0.27
SEC13-201ENST00000337354 ELFN2Q5R3F8 820 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 OTPQ5XKR4 325 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 ZNF774Q6NX45 483 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 UNQ6126/PRO20091Q6UXV3 157 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 ZNF704Q6ZNC4 412 aaPredicted RBP13.33□□□□□ -0.27
SEC13-201ENST00000337354 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.27
SEC13-201ENST00000337354 SLC16A9Q7RTY1 509 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 OR4F15Q8NGB8 312 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 OR6N2Q8NGY6 317 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 AKR7LQ8NHP1 331 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 MNTQ99583 582 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.27
SEC13-201ENST00000337354 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.27
SEC13-201ENST00000337354 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
SEC13-201ENST00000337354 IGHV2OR16-5A0A0B4J2B6 119 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 SYNGR3O43761 229 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 DOK2O60496 412 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 ENTPD6O75354 484 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 NUDT6P53370 316 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 AQP4P55087 323 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 ISL1P61371 349 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 IL5RAQ01344 420 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 ARL9Q6T311 187 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 B3GLCTQ6Y288 498 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 DPY19L4Q7Z388 723 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 TMEM200AQ86VY9 491 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms