RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HCFC2Q9Y5Z7 792 aa12□□□□□ -0.49
HLCS-201ENST00000336648 PHLPP1O60346 1717 aa12□□□□□ -0.49
HLCS-201ENST00000336648 PMS2P1A4D2B8 440 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 LTC4SQ16873 150 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 MOGAT2Q3SYC2 334 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 NLRC3Q7RTR2 1065 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 LRRTM1Q86UE6 522 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 FAM26EQ8N5C1 309 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 BLNKQ8WV28 456 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 KCNE4Q8WWG9 221 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 NDUFB11Q9NX14 153 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 OTUD1Q5VV17 481 aaPredicted RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 TAS1R1Q7RTX1 841 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 C19orf53Q9UNZ5 99 aaPredicted RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 RNF24Q9Y225 148 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 DCTN6O00399 190 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 SCO1O75880 301 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 LGI1O95970 557 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 RBP2P50120 134 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 SYS1Q8N2H4 156 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 C11orf40Q8WZ69 217 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 RASD2Q96D21 266 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 OR5M11Q96RB7 305 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 TWSG1Q9GZX9 223 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 TAS2R5Q9NYW4 299 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 TEX50A0A1B0GTY4 177 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 F11P03951 625 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 NME1P15531 152 aaKnown RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 OR10A3P58181 314 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 DEFB103AP81534 67 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 ZNF628Q5EBL2 1059 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 PRAMEF20Q5VT98 475 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 SAXO2Q658L1 398 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 LILRA2Q8N149 483 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 PNPLA1Q8N8W4 532 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 GSX2Q9BZM3 304 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 POFUT1Q9H488 388 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 PLEKHA2Q9HB19 425 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 TUBAL3A6NHL2 446 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 FGF7P21781 194 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 ELLP55199 621 aaPredicted RBP11.99□□□□□ -0.49
HLCS-201ENST00000336648 LRRC26Q2I0M4 334 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 ADGRG3Q86Y34 549 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 CELF2-AS1Q8N7Q2 184 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 SLC7A6Q92536 515 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 C12orf10Q9HB07 376 aa11.99□□□□□ -0.49
HLCS-201ENST00000336648 ZNF816-ZNF321PA0A0X1KG74 233 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 M0QYG6 137 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CD27P26842 260 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 SOX18P35713 384 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 ARR3P36575 388 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 PFN3P60673 137 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 LHFPL2Q6ZUX7 228 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 PGBD5Q8N414 524 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 AKR1E2Q96JD6 320 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 ZNF768Q9H5H4 540 aaKnown RBP11.98□□□□□ -0.49
HLCS-201ENST00000336648 ACOXLQ9NUZ1 547 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 EDDM3BP56851 147 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 XKR7Q5GH72 579 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 PAQR9Q6ZVX9 377 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 LMNTD1Q8N9Z9 388 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
HLCS-201ENST00000336648 CHST8Q9H2A9 424 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CHST11Q9NPF2 352 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 TIMM10BQ9Y5J6 103 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 AQP7O14520 342 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 PHOX2AO14813 284 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 NID1P14543 1247 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 TM4SF4P48230 202 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 LIM2P55344 173 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 GUK1Q16774 197 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 LINC00346Q8IVM7 164 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 SLC38A6Q8IZM9 456 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 C11orf42Q8N5U0 333 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 OR5D18Q8NGL1 313 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 GPR119Q8TDV5 335 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 NIPSNAP1Q9BPW8 284 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CDCA4Q9BXL8 241 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CTDSP1Q9GZU7 261 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 TOLLIPQ9H0E2 274 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 TRAV20A0A0B4J274 112 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 NPPBP16860 134 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CCKARP32238 428 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 BCL6P41182 706 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 MRPL19P49406 292 aaKnown RBP11.98□□□□□ -0.49
HLCS-201ENST00000336648 SEMA3BQ13214 749 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms