RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ARL9Q6T311 187 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF101Q8IZC7 436 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 ADGRG5Q8IZF4 528 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 OR9Q2Q8NGE9 314 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 SNX33Q8WV41 574 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 REEP1Q9H902 201 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 NAT2P11245 290 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 HIST1H1CP16403 213 aaKnown RBP23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 HOXB6P17509 224 aaKnown RBP23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF718Q3SXZ3 478 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 OR2T5Q6IEZ7 315 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 OR52L1Q8NGH7 329 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 OR2T29Q8NH02 315 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 OR4K13Q8NH42 304 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 NMNAT3Q96T66 252 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 BPESC1Q9GZL8 116 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 ELOVL3Q9HB03 270 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 YAE1D1Q9NRH1 226 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 SAMHD1Q9Y3Z3 626 aaKnown RBP23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 CDH10Q9Y6N8 788 aa23.66■■□□□ 1.38
ATPAF1-201ENST00000329231 DHRS12A0PJE2 317 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 SGCEO43556 437 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 DOK2O60496 412 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 ICMTO60725 284 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 GCH1P30793 250 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 CENPAP49450 140 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 KCNMB1Q16558 191 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 ALKBH6Q3KRA9 238 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF770Q6IQ21 691 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 ABHD4Q8TB40 342 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 C4orf45Q96LM5 186 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 TSSK2Q96PF2 358 aa23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 MMADHCQ9H3L0 296 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 HINT3Q9NQE9 182 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-201ENST00000329231 NAV3Q8IVL0 2385 aa23.64■■□□□ 1.38
ATPAF1-201ENST00000329231 MPZL1O95297 269 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 GASTP01350 101 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 IGHV3-13P01766 116 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 MT-ND5P03915 603 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 HTR5AP47898 357 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 ARHGDIAP52565 204 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 TMEM154Q6P9G4 183 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 SPATA24Q86W54 205 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 MARS2Q96GW9 593 aaKnown RBP23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 CHID1Q9BWS9 393 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 EGLN3Q9H6Z9 239 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 SRA1Q9HD15 236 aaKnown RBP23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 PLEK2Q9NYT0 353 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 ASH2LQ9UBL3 628 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 B9D1Q9UPM9 204 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 POLR1DQ9Y2S0 133 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 U3KQV3 271 aa23.64■■□□□ 1.37
ATPAF1-201ENST00000329231 PPP1CBP62140 327 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 PPP1R8Q12972 351 aaKnown RBP23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 MICAQ29983 383 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 CLEC12AQ5QGZ9 265 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 SPATA46Q5T0L3 261 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 CYB5R2Q6BCY4 276 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 RASSF6Q6ZTQ3 369 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 VASH1Q7L8A9 365 aaPredicted RBP23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 OR6V1Q8N148 313 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 AQP11Q8NBQ7 271 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 SLC25A40Q8TBP6 338 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 CANT1Q8WVQ1 401 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 RACGAP1Q9H0H5 632 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 IL20Q9NYY1 176 aa23.63■■□□□ 1.37
ATPAF1-201ENST00000329231 IGLV1-36A0A0B4J1U3 117 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 IGHV4-61A0A0C4DH41 118 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 C17orf100A8MU93 164 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 A8MV72 311 aaPredicted RBP23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 H3BSA7 217 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 DCTN6O00399 190 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 ABHD16AO95870 558 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 HPXP02790 462 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 GZMKP49863 264 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 GLO1Q04760 184 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 GK3PQ14409 553 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 PCGF3Q3KNV8 242 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 ELFN2Q5R3F8 820 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 MBNL2Q5VZF2 373 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 OTPQ5XKR4 325 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 RFPL4BQ6ZWI9 263 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 KLF14Q8TD94 323 aaPredicted RBP23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 RDH5Q92781 318 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 OR2J1Q9GZK6 312 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 RPRD1BQ9NQG5 326 aaKnown RBP23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 VNN3Q9NY84 501 aa23.62■■□□□ 1.37
ATPAF1-201ENST00000329231 TCRBV3S1A0A5B6 114 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 LYNX1G3V0Z9 82 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 NGFP01138 241 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 IGHV4-31P0DP07 118 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 LYNX1P0DP58 116 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 GAAP10253 952 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 ZNF23P17027 643 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 GSTM3P21266 225 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 MRPS11P82912 194 aaKnown RBP23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 RIN1Q13671 783 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 SLC35F1Q5T1Q4 408 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 C6orf52Q5T4I8 152 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 ZBTB46Q86UZ6 589 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms