RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZCCHC4Q9H5U6 513 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 METTL21EPA6NDL7 271 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 PHYHO14832 338 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 NMBP08949 121 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 EGR3Q06889 387 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 COX15Q7KZN9 410 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 GVQW1Q8N7I0 195 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 ASB12Q8WXK4 309 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 CDCA3Q99618 268 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 PELOQ9BRX2 385 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 GMEB2Q9UKD1 530 aa11.61□□□□□ -0.55
HMGCS1-201ENST00000325110 ABHD16AO95870 558 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 IL5P05113 134 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 TLE3Q04726 772 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 CCINQ13939 588 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 UBXN2BQ14CS0 331 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 ZBTB8AQ96BR9 441 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 MRPL38Q96DV4 380 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 CMTM3Q96MX0 182 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 KLRF1Q9NZS2 232 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 CPN1P15169 458 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 DLSTP36957 453 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC6A8P48029 635 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 MOGAT2Q3SYC2 334 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 EXOSC6Q5RKV6 272 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 GLRX5Q86SX6 157 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 TRAPPC6BQ86SZ2 158 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 NAXEQ8NCW5 288 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 ADAMTS18Q8TE60 1221 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 ZDHHC12Q96GR4 267 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 TRBV5-5A0A0J9YX44 114 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 ATP6V1G2-DDX39BF2Z307 99 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 AVPR2P30518 371 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 CSNK1EP49674 416 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 AKR1D1P51857 326 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 CAPZA1P52907 286 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 IL13RA1P78552 427 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 INSM1Q01101 510 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 PMPCAQ10713 525 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 TMEM81Q6P7N7 255 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 OR6N1Q8NGY5 312 aa11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 FAM71F1Q96KD3 344 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-201ENST00000325110 SYT7O43581 403 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 GABRA1P14867 456 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 M6PRP20645 277 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC22A6Q4U2R8 563 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ADGRG3Q86Y34 549 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 OR5D18Q8NGL1 313 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 OR52A1Q9UKL2 312 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 DISC1C4P0D8 188 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 MPIG6BO95866 241 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF20P17024 532 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 PI3P19957 117 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ABCD3P28288 659 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 HSD11B1P28845 292 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 TAGLNQ01995 201 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ARFRP1Q13795 201 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 AWAT2Q6E213 333 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 RAB12Q6IQ22 244 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 PNPLA2Q96AD5 504 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ARL5BQ96KC2 179 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF75AQ96N20 296 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 MESP1Q9BRJ9 268 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF304Q9HCX3 659 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 NPTNQ9Y639 398 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 MRPS18BQ9Y676 258 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 TLCD2A6NGC4 264 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 CD38P28907 300 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 NHLRC3Q5JS37 347 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF684Q5T5D7 378 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 PAPD4Q6PIY7 484 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ADGRE4PQ86SQ3 457 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 LAT2Q9GZY6 243 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 ASF1BQ9NVP2 202 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 MRPL22Q9NWU5 206 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 CLEC1BQ9P126 229 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 CTSFQ9UBX1 484 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 GPR160Q9UJ42 338 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 CA14Q9ULX7 337 aa11.59□□□□□ -0.55
HMGCS1-201ENST00000325110 A0A1W2PPC4 97 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 OR5H14A6NHG9 310 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 HCKP08631 526 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 SFTPDP35247 375 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 EMC4Q5J8M3 183 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 OR52N5Q8NH56 324 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF578Q96N58 590 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 A8MVM7 634 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms