RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SERPINF1P36955 418 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 RBPJQ06330 500 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 STAC2Q6ZMT1 411 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 ARIH2OSQ8N7S6 290 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 TMEM178AQ8NBL3 297 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 FAM71CQ8NEG0 241 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 ST7LQ8TDW4 575 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 KCNJ15Q99712 375 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SAMD10Q9BYL1 202 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 FITM1A5D6W6 292 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 GPR171O14626 319 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 DUSP1P28562 367 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SSX2Q16385 188 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 PLXDC2Q6UX71 529 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 THOC3Q96J01 351 aaKnown RBP9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC6A13Q9NSD5 602 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 ZNF225Q9UK10 706 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 FOCADQ5VW36 1801 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 FER1L6Q2WGJ9 1857 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 KCNE1BA0A087WTH5 132 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SELEP16581 610 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 NKG7Q16617 165 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 USP51Q70EK9 711 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SYT13Q7L8C5 426 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC17A4Q9Y2C5 497 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 MRPS2Q9Y399 296 aaKnown RBP9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 MAGEB4O15481 346 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 OR8U8P0C7N1 319 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 GNB3P16520 340 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 MED30Q96HR3 178 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 GNG12Q9UBI6 72 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 NKX6-3A6NJ46 265 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ICMTO60725 284 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 RNF165Q6ZSG1 346 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 KANSL1Q7Z3B3 1105 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 CPEB2Q7Z5Q1 589 aaKnown RBP9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TEX19Q8NA77 164 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TSLPQ969D9 159 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 APH1AQ96BI3 265 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 KIRREL1Q96J84 757 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 RNF170Q96K19 258 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 RTL8AQ9BWD3 113 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 A4GNTQ9UNA3 340 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SERTM1A2A2V5 107 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR2F2O95006 317 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ALX3O95076 343 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 GABRB1P18505 474 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 LAP3P28838 519 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR2F1Q13607 317 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR8B8Q15620 311 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 CORO6Q6QEF8 472 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 CATSPERDQ86XM0 798 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR2A1Q8NGT9 310 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ZNF416Q9BWM5 594 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 HRH3Q9Y5N1 445 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ADAMTSL1Q8N6G6 1762 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 CTF1Q16619 201 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 NKAIN1Q4KMZ8 207 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR51A4Q8NGJ6 313 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 OR10J5Q8NHC4 309 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ST8SIA1Q92185 356 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 PBOV1Q9GZY1 135 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 IFITM5A6NNB3 132 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 F2RL1P55085 397 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 GPR85P60893 370 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SHHQ15465 462 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 C2orf76Q3KRA6 126 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 FBXL6Q8N531 539 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SIRT6Q8N6T7 355 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ARSGQ96EG1 525 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ZNF2Q9BSG1 426 aaPredicted RBP9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 FAM234AQ9H0X4 552 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 DECR2Q9NUI1 292 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 GHRLQ9UBU3 117 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TMEFF2Q9UIK5 374 aaPredicted RBP9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 FLVCR2Q9UPI3 526 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 NUDT19A8MXV4 375 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 HS3ST1O14792 307 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TAAR5O14804 337 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TCN2P20062 427 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 RBP2P50120 134 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC17A1Q14916 467 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TRIM61Q5EBN2 209 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 VWA2Q5GFL6 755 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SUMF1Q8NBK3 374 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 JAM3Q9BX67 310 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC25A32Q9H2D1 315 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 PADI1Q9ULC6 663 aa9.93□□□□□ -0.82
SNRNP200-201ENST00000323853 TIMM10BQ9Y5J6 103 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms