RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GUSBP11Q6P575 273 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.99■□□□□ 0.79
PNKP-201ENST00000322344 NKAIN3Q8N8D7 197 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 RNF133Q8WVZ7 376 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 GINS4Q9BRT9 223 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 SCPEP1Q9HB40 452 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 KLHL13Q9P2N7 655 aa19.99■□□□□ 0.79
PNKP-201ENST00000322344 C19orf25Q9UFG5 118 aaPredicted RBP19.99■□□□□ 0.79
PNKP-201ENST00000322344 TMEM269A0A1B0GVZ9 245 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 PYCARD-AS1I3L0S3 204 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 KDM4BO94953 1096 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 IFNA7P01567 189 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 H2BFMP0C1H6 154 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 OR3A3P47888 321 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 GLYATL3Q5SZD4 288 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 LRFN4Q6PJG9 635 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 ADGRE4PQ86SQ3 457 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 OR10H5Q8NGA6 315 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 HLA-CQ95604 372 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 FOXRED1Q96CU9 486 aaPredicted RBP19.98■□□□□ 0.79
PNKP-201ENST00000322344 RBP7Q96R05 134 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 MESP1Q9BRJ9 268 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 SERINC1Q9NRX5 453 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 RPH3AQ9Y2J0 694 aaPredicted RBP19.98■□□□□ 0.79
PNKP-201ENST00000322344 OR2A4O95047 310 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 CYC1P08574 325 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 MMP16P51512 607 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 C1orf100Q5SVJ3 147 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 ZNF385CQ66K41 422 aaPredicted RBP19.98■□□□□ 0.79
PNKP-201ENST00000322344 SLC36A1Q7Z2H8 476 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 FTMTQ8N4E7 242 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 UXS1Q8NBZ7 420 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 ADPRHL1Q8NDY3 354 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 PTX4Q96A99 478 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 OR2A7Q96R45 310 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 MED29Q9NX70 200 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 PIPOXQ9P0Z9 390 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 UNC13CQ8NB66 2214 aa19.98■□□□□ 0.79
PNKP-201ENST00000322344 EXPH5Q8NEV8 1989 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 PCNX3Q9H6A9 2034 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 LOC390937A0A1W2PQ73 354 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 LINC00862A6NCI5 91 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 CCL7P80098 99 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 GUCA2AQ02747 115 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 SNTA1Q13424 505 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 TMEM205Q6UW68 189 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 LINC00346Q8IVM7 164 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 CLEC1AQ8NC01 280 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 SLC22A8Q8TCC7 542 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 CITED4Q96RK1 184 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 SLCO5A1Q9H2Y9 848 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 KCNK15Q9H427 330 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 MYOTQ9UBF9 498 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 IGHV5-10-1A0A0J9YXX1 117 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 A0A1W2PQM1 296 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 LPLP06858 475 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 TAS2R19P59542 299 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 TSPAN5P62079 268 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 PLPPR5Q32ZL2 321 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 LYSMD4Q5XG99 296 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 CRB3Q9BUF7 120 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 TMPRSS13Q9BYE2 586 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 CHIAQ9BZP6 476 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 METTL7AQ9H8H3 244 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 WIF1Q9Y5W5 379 aa19.97■□□□□ 0.79
PNKP-201ENST00000322344 ASXL3Q9C0F0 2248 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 IGKV1D-43A0A0B4J1Z2 117 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 OR2M5A3KFT3 312 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 LDLRAD4O15165 306 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 BIDP55957 195 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 ESCO2Q56NI9 601 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 STEAP1BQ6NZ63 245 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 CDH26Q8IXH8 852 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 TMEM229BQ8NBD8 167 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 SPSB2Q99619 263 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 DPCDQ9BVM2 203 aaPredicted RBP19.96■□□□□ 0.79
PNKP-201ENST00000322344 SLC26A1Q9H2B4 701 aa19.96■□□□□ 0.79
PNKP-201ENST00000322344 ZNF107Q9UII5 783 aaPredicted RBP19.96■□□□□ 0.79
PNKP-201ENST00000322344 MRPS18BQ9Y676 258 aaKnown RBP19.96■□□□□ 0.79
PNKP-201ENST00000322344 H3BML4 177 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 TOXO94900 526 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 MELTFP08582 738 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 VSIG10L2P0DP72 767 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 PTGDSP41222 190 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 THEM4Q5T1C6 240 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 KLHL24Q6TFL4 600 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 BPHLQ86WA6 291 aaPredicted RBP19.95■□□□□ 0.78
PNKP-201ENST00000322344 WDFY1Q8IWB7 410 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 C11orf40Q8WZ69 217 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 CA10Q9NS85 328 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 CENPMQ9NSP4 180 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 UPB1Q9UBR1 384 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 CGGBP1Q9UFW8 167 aaPredicted RBP19.95■□□□□ 0.78
PNKP-201ENST00000322344 B3GALT1Q9Y5Z6 326 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 LY6G6EA0A0G2JKS1 128 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 MYBPHQ13203 477 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 FAM69BQ5VUD6 431 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 HDDC2Q7Z4H3 204 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 PPP1R3BQ86XI6 285 aa19.95■□□□□ 0.78
PNKP-201ENST00000322344 UEVLDQ8IX04 471 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms