RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FBXO45P0C2W1 286 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 PRPS1P60891 318 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 GMFBP60983 142 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ACTA2P62736 377 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ACTG2P63267 376 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 GUCA2AQ02747 115 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 OR2W3Q7Z3T1 314 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 OR10AC1Q8NH08 325 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 GPR119Q8TDV5 335 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 HAO2Q9NYQ3 351 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ACOT7O00154 380 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 MGMTP16455 207 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ABCD3P28288 659 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 EBPQ15125 230 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 LY6G6FQ5SQ64 297 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 LIPNQ5VXI9 398 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 TMPRSS9Q7Z410 1059 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 PLXDC1Q8IUK5 500 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 OR51S1Q8NGJ8 323 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 RGP1Q92546 391 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 DVL3Q92997 716 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 TSPAN32Q96QS1 320 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 BIN3Q9NQY0 253 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM218A2RU14 115 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 RFPL4AA6NLU0 287 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 RFPL4AL1F8VTS6 287 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 MAS1P04201 325 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 RFC3P40938 356 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 SQSTM1Q13501 440 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 RBMS2Q15434 407 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 MESTQ5EB52 335 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 LINC01590Q5TEZ4 76 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 PTCRAQ6ISU1 281 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC16A13Q7RTY0 426 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 POMGNT2Q8NAT1 580 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 OR51A4Q8NGJ6 313 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 PPP1R14AQ96A00 147 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 HAVCR1Q96D42 359 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 CMTM3Q96MX0 182 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF285Q96NJ3 590 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 LAMP5Q9UJQ1 280 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 PCDHB10Q9UN67 800 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 EDARQ9UNE0 448 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 VDAC3Q9Y277 283 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 GDF9O60383 454 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 CRYBA1P05813 215 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 PNMTP11086 282 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 MEP1BQ16820 701 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 JMJD6Q6NYC1 403 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC38A9Q8NBW4 561 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 ADAMTS18Q8TE60 1221 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 SFT2D1Q8WV19 159 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 ADIPOR1Q96A54 375 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 AMELYQ99218 206 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 V9GY05 133 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM200CA6NKL6 621 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 GLCEO94923 617 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 ADRA2CP18825 462 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 BDKRB2P30411 391 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC29A4Q7RTT9 530 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 OR2I1PQ8NGU4 316 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 KIF26BQ2KJY2 2108 aa13.98□□□□□ -0.17
SHROOM1-201ENST00000319854 SULT1C2O00338 296 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 SULT1B1O43704 296 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 IGKV3-11P04433 115 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 DHPSP49366 369 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 PPIAP62937 165 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 ELAVL1Q15717 326 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 C4orf46Q504U0 113 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 RPL22L1Q6P5R6 122 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 RBMS3Q6XE24 437 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 EID2Q8N6I1 236 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 METTL21AQ8WXB1 218 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 C8orf44Q96CB5 159 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 WWTR1Q9GZV5 400 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 DUSP15Q9H1R2 295 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 KCNG2Q9UJ96 466 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 OR6C76A6NM76 312 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 KCNAB3O43448 404 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 TIAF1O95411 115 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 UBBP0CG47 229 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 UBCP0CG48 685 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 IL11P20809 199 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 MAPK3P27361 379 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 SDHAP31040 664 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 AFF3P51826 1226 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 RPS4XP62701 263 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 RPS27AP62979 156 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 UBA52P62987 128 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 MICBQ29980 383 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 LRRC37A5PQ49AS3 106 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 FNDC7Q5VTL7 733 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 FAM220AQ7Z4H9 259 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 GLYATL2Q8WU03 294 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 DAZLQ92904 295 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 CCDC74AQ96AQ1 378 aa13.97□□□□□ -0.17
SHROOM1-201ENST00000319854 CRB3Q9BUF7 120 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms