RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 DDIT4LQ96D03 193 aa12.32□□□□□ -0.44
ATG4C-201ENST00000317868 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
ATG4C-201ENST00000317868 C1orf198Q9H425 327 aa12.32□□□□□ -0.44
ATG4C-201ENST00000317868 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
ATG4C-201ENST00000317868 HHLA2Q9UM44 414 aa12.32□□□□□ -0.44
ATG4C-201ENST00000317868 CABIN1Q9Y6J0 2220 aa12.32□□□□□ -0.44
ATG4C-201ENST00000317868 A0A0A6YYH2 397 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 A6NJ64 397 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 RAD1O60671 282 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 MMP16P51512 607 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 PLPPR5Q32ZL2 321 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 TMEM205Q6UW68 189 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ELMOD2Q8IZ81 293 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 FAM206AQ9NX38 181 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 MED11Q9P086 117 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 OR52A1Q9UKL2 312 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 B3GALT5Q9Y2C3 310 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 CD2P06729 351 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 HEXBP07686 556 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ESCO2Q56NI9 601 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 OR51A2Q8NGJ7 313 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 RBP7Q96R05 134 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 SPSB2Q99619 263 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 SLC26A1Q9H2B4 701 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF107Q9UII5 783 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 EMC9Q9Y3B6 208 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 COL27A1Q8IZC6 1860 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 TRAV18A0A075B6X5 111 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 NOS1APO75052 506 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 TSC22D2O75157 780 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ITGB2P05107 769 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 FBXO45P0C2W1 286 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 MSX1P28360 303 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 EPHA8P29322 1005 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 PRSS3P35030 304 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF81P51508 661 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 RAP2BP61225 183 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF239Q16600 458 aaKnown RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF529Q6P280 563 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 PAPD4Q6PIY7 484 aaKnown RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ADGRE4PQ86SQ3 457 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 NKAIN3Q8N8D7 197 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 SEH1LQ96EE3 360 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 SLC25A44Q96H78 314 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 ALX4Q9H161 411 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 SCPEP1Q9HB40 452 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 EIF3KQ9UBQ5 218 aaKnown RBP12.31□□□□□ -0.44
ATG4C-201ENST00000317868 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
ATG4C-201ENST00000317868 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 LOC101059948A0A1B0GTJ6 334 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 CYC1P08574 325 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 UBCP0CG48 685 aaKnown RBP12.3□□□□□ -0.44
ATG4C-201ENST00000317868 POU3F1Q03052 451 aaPredicted RBP12.3□□□□□ -0.44
ATG4C-201ENST00000317868 SNTA1Q13424 505 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF704Q6ZNC4 412 aaPredicted RBP12.3□□□□□ -0.44
ATG4C-201ENST00000317868 TMEM229BQ8NBD8 167 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 OR6C1Q96RD1 312 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 SERINC1Q9NRX5 453 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 SNAPC5O75971 98 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 LPLP06858 475 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 GPR85P60893 370 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 TLE3Q04726 772 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 GLYATL3Q5SZD4 288 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 OR10S1Q8NGN2 331 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 GINS4Q9BRT9 223 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 MED29Q9NX70 200 aa12.3□□□□□ -0.44
ATG4C-201ENST00000317868 IGHV5-10-1A0A0J9YXX1 117 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 CD74P04233 296 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 ZNF823P16415 610 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 CXCL2P19875 107 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 RAB6AP20340 208 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 SSTR2P30874 369 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 ACTBP60709 375 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 ACTG1P63261 375 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 TMEM244Q5VVB8 128 aa12.29□□□□□ -0.44
ATG4C-201ENST00000317868 GUSBP11Q6P575 273 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms