RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 EMC3Q9P0I2 261 aa12.41□□□□□ -0.42
VAMP2-201ENST00000316509 GTF2A1LQ9UNN4 478 aa12.41□□□□□ -0.42
VAMP2-201ENST00000316509 A0A0B4J293 547 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 TCRBP04435 133 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 JMJD7P0C870 316 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ARSBP15848 533 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 BTCP35070 178 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 GDNFP39905 211 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 PTH2RP49190 550 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 BCL2L15Q5TBC7 163 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 TMEM164Q5U3C3 297 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 JMJD6Q6NYC1 403 aaPredicted RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 LIX1LQ8IVB5 337 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ESX1Q8N693 406 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 DTX3Q8N9I9 347 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ING3Q9NXR8 418 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 NUFIP1Q9UHK0 495 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 EMC9Q9Y3B6 208 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 N6AMT1Q9Y5N5 214 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 A0A087WV48 116 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 LOC100289279A0A1B0GTE1 492 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 GLSO94925 669 aaPredicted RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 CD59P13987 128 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 SFTPDP35247 375 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 DNASE1L1P49184 302 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 RRAS2P62070 204 aaPredicted RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 LSM6P62312 80 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ELFN2Q5R3F8 820 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 BTN2A1Q7KYR7 527 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 ELMOD2Q8IZ81 293 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 PTX4Q96A99 478 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 SMAD5Q99717 465 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 SF3B5Q9BWJ5 86 aaKnown RBP12.4□□□□□ -0.42
VAMP2-201ENST00000316509 CACNG6Q9BXT2 260 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 TAS2R8Q9NYW2 309 aa12.4□□□□□ -0.42
VAMP2-201ENST00000316509 TRIOO75962 3097 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 A0A0A6YYH2 397 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OR2M5A3KFT3 312 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 C7orf66A4D0T2 115 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 A6NJ64 397 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 C21orf140B9A014 251 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TCEAL6Q6IPX3 200 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 WDFY1Q8IWB7 410 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 PNPLA2Q96AD5 504 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OR2M2Q96R28 347 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 B3GNT4Q9C0J1 378 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 DDX28Q9NUL7 540 aaKnown RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 FAM206AQ9NX38 181 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 CCDC187A0A096LP49 1063 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 ZNF878C9JN71 531 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 CDK2AP1O14519 115 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 YES1P07947 543 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 CDK2P24941 298 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 AVPR2P30518 371 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OTX2P32243 289 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 SRP9P49458 86 aaKnown RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 SUCLG1P53597 346 aaKnown RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 CLDN12P56749 244 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TAS2R20P59543 309 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 RAET1LQ5VY80 246 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 ESPNLQ6ZVH7 1005 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 PRSS45Q7RTY3 260 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TIPARPQ7Z3E1 657 aaKnown RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 MDGA2Q7Z553 956 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 OR56B4Q8NH76 319 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 FAM3DQ96BQ1 224 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 SCMH1Q96GD3 660 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 GNRHR2Q96P88 292 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
VAMP2-201ENST00000316509 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
VAMP2-201ENST00000316509 TECTAO75443 2155 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 A0A1W2PPL8 197 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 QDPRP09417 244 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 CTSSP25774 331 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 GABREP78334 506 aa12.38□□□□□ -0.43
VAMP2-201ENST00000316509 FOXK1P85037 733 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms