RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PRPS1P60891 318 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 IL18Q14116 193 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 KCNAB1Q14722 419 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 QPRTQ15274 297 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ALG10BQ5I7T1 473 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ABLIM2Q6H8Q1 611 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SLC18B1Q6NT16 456 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PLEKHM3Q6ZWE6 761 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 FCRLAQ7L513 359 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SLC6A7Q99884 636 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 NUDT9Q9BW91 350 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 METTL17Q9H7H0 456 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SEBOXQ9HB31 216 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 RPRD1BQ9NQG5 326 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 MALT1Q9UDY8 824 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 AK6Q9Y3D8 172 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PRSS37A4D1T9 235 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TFECO14948 347 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 CA11O75493 328 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 CER1O95813 267 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ACTL6AO96019 429 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 MRPL3P09001 348 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 RGS8P57771 180 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SEC61A1P61619 476 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 VAX1Q5SQQ9 334 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 IDNKQ5T6J7 187 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 WBP2NLQ6ICG8 309 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 LCN10Q6JVE6 187 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 DEGS2Q6QHC5 323 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TMPPEQ6ZT21 453 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM123Q8N131 208 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 RBPMSQ93062 196 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SLC22A18Q96BI1 424 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PHPT1Q9NRX4 125 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TUBD1Q9UJT1 453 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 RRP8O43159 456 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PPIHO43447 177 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TRAF3IP2O43734 574 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SRPX2O60687 465 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ICOSLGO75144 302 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 STOMP27105 288 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 SLC6A6P31641 620 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 GABRA3P34903 492 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 CASRP41180 1078 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 CLDN15P56746 228 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 C2orf76Q3KRA6 126 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PRRT3Q5FWE3 981 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 DHRS7BQ6IAN0 325 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 Q6ZS49 121 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF627Q7L945 461 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 UBE2J2Q8N2K1 259 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ZIC4Q8N9L1 334 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 AVL9Q8NBF6 648 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 OR2I1PQ8NGU4 316 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM54Q969K7 222 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 PHYHIPLQ96FC7 376 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 ELF4Q99607 663 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 C5orf66Q9H5L9 145 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 APMAPQ9HDC9 416 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 LRP12Q9Y561 859 aa6.91□□□□□ -1.3
CNOT4-201ENST00000315544 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-201ENST00000315544 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 A0A1W2PPL8 197 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 OR6C74A6NCV1 312 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM212A6NML5 194 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ANXA2P2A6NMY6 339 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 LMO7DNF2Z398 122 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 BCAT2O15382 392 aaPredicted RBP6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF208O43345 1280 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 PTNP21246 168 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 MDKP21741 143 aaPredicted RBP6.9□□□□□ -1.3
CNOT4-201ENST00000315544 AQP2P41181 271 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 BIKQ13323 160 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 PHYHD1Q5SRE7 291 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 WDR74Q6RFH5 385 aaPredicted RBP6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF679Q8IYX0 411 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 TAGAPQ8N103 731 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 LRTM2Q8N967 370 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 SFXN2Q96NB2 322 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 CACNG6Q9BXT2 260 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 MS4A7Q9GZW8 240 aaPredicted RBP6.9□□□□□ -1.3
CNOT4-201ENST00000315544 LPAR5Q9H1C0 372 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 DPAGT1Q9H3H5 408 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 DIABLOQ9NR28 239 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 NAAAQ02083 359 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 HLA-BQ31612 363 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 METTL11BQ5VVY1 283 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 PLET1Q6UQ28 207 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 TMPRSS12Q86WS5 348 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 BOD1Q96IK1 185 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ADGRG7Q96K78 797 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ARRDC1-AS1Q9H2J1 176 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 TXNIPQ9H3M7 391 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms