RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 SLC25A53Q5H9E4 307 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 CLLU1Q5K131 121 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 STEAP1BQ6NZ63 245 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 PAPD4Q6PIY7 484 aaKnown RBP17.51■□□□□ 0.39
SPNS1-201ENST00000311008 LRFN4Q6PJG9 635 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 C16orf47Q6ZP98 133 aaPredicted RBP17.51■□□□□ 0.39
SPNS1-201ENST00000311008 MDGA2Q7Z553 956 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 ADGRE4PQ86SQ3 457 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 ASB13Q8WXK3 278 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 C5orf34Q96MH7 638 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 ALX4Q9H161 411 aaPredicted RBP17.51■□□□□ 0.39
SPNS1-201ENST00000311008 MED11Q9P086 117 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 MAB21L2Q9Y586 359 aa17.51■□□□□ 0.39
SPNS1-201ENST00000311008 ABCA7Q8IZY2 2146 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 TMEM269A0A1B0GVZ9 245 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 A0A1W2PNV4 684 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 LOC390937A0A1W2PQ73 354 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 LIPT2A6NK58 231 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 SSTR2P30874 369 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 MMP16P51512 607 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 ZNF41P51814 821 aaPredicted RBP17.5■□□□□ 0.39
SPNS1-201ENST00000311008 EXOSC2Q13868 293 aaKnown RBP17.5■□□□□ 0.39
SPNS1-201ENST00000311008 C1orf100Q5SVJ3 147 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 TMEM229BQ8NBD8 167 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 RNF133Q8WVZ7 376 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 CA10Q9NS85 328 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 UNC13CQ8NB66 2214 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 ADAMTS20P59510 1910 aa17.5■□□□□ 0.39
SPNS1-201ENST00000311008 TRBV11-1A0A0K0K1C0 115 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 PLSCR5A0PG75 271 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 TUBAL3A6NHL2 446 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RGS11O94810 467 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 MPC2O95563 127 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RLN1P04808 185 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 H2BFMP0C1H6 154 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 EMP2P54851 167 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RAB14P61106 215 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 GUCA2AQ02747 115 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 FOXF1Q12946 379 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 BIVMQ86UB2 503 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 THAP3Q8WTV1 239 aaPredicted RBP17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RBP7Q96R05 134 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 PPP4R1LQ9P1A2 415 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 VDAC3Q9Y277 283 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RPH3AQ9Y2J0 694 aaPredicted RBP17.49■□□□□ 0.39
SPNS1-201ENST00000311008 FER1L5A0AVI2 2057 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 IGLV3-32A0A0A0MS00 114 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 ZNF354AO60765 605 aaPredicted RBP17.49■□□□□ 0.39
SPNS1-201ENST00000311008 ONECUT2O95948 504 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 VSIG10L2P0DP72 767 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 FMODQ06828 376 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 SHBQ15464 509 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 GRK1Q15835 563 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 ARSKQ6UWY0 536 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 ZNF574Q6ZN55 896 aaPredicted RBP17.49■□□□□ 0.39
SPNS1-201ENST00000311008 OR10H5Q8NGA6 315 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 OR51S1Q8NGJ8 323 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 OR6C1Q96RD1 312 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 SERINC1Q9NRX5 453 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 KLRF1Q9NZS2 232 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 RARRES3Q9UL19 164 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 PCNX3Q9H6A9 2034 aa17.49■□□□□ 0.39
SPNS1-201ENST00000311008 C2orf72A6NCS6 295 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 LDLRAD4O15165 306 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 SCRG1O75711 98 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ZFAND5O76080 213 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 FOSL2P15408 326 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 RAB6AP20340 208 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 NFYAP23511 347 aaPredicted RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 CXCL12P48061 93 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 MPPED2Q15777 294 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 SMUG1Q53HV7 270 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 GABRG1Q8N1C3 465 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ADPRHL1Q8NDY3 354 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 CCDC107Q8WV48 283 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 SEH1LQ96EE3 360 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 SLC25A21Q9BQT8 299 aaPredicted RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 MRPS18BQ9Y676 258 aaKnown RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 CD3DP04234 171 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 OPCMLQ14982 345 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 NR0B2Q15466 257 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 TMEM205Q6UW68 189 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ZNF627Q7L945 461 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 CPEB2Q7Z5Q1 589 aaKnown RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 BPHLQ86WA6 291 aaPredicted RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ELMOD2Q8IZ81 293 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 SLC38A9Q8NBW4 561 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 PMEPA1Q969W9 287 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 PNPLA2Q96AD5 504 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 CLDN23Q96B33 292 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 NPAS1Q99742 590 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 APMAPQ9HDC9 416 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 KLHL13Q9P2N7 655 aa17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ATXN7L1Q9ULK2 861 aaPredicted RBP17.48■□□□□ 0.39
SPNS1-201ENST00000311008 ALPK2Q86TB3 2170 aa17.47■□□□□ 0.39
SPNS1-201ENST00000311008 TMEM200CA6NKL6 621 aa17.47■□□□□ 0.39
SPNS1-201ENST00000311008 L7N2F9 121 aa17.47■□□□□ 0.39
SPNS1-201ENST00000311008 CYC1P08574 325 aa17.47■□□□□ 0.39
SPNS1-201ENST00000311008 CSRP2Q16527 193 aa17.47■□□□□ 0.39
SPNS1-201ENST00000311008 THEM4Q5T1C6 240 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms