RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
SNED1-201ENST00000310397 CGGBP1Q9UFW8 167 aaPredicted RBP12.05□□□□□ -0.48
SNED1-201ENST00000310397 B4GALT3O60512 393 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 BTLAQ7Z6A9 289 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 GOT1L1Q8NHS2 421 aaPredicted RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 BADQ92934 168 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 MYLKQ15746 1914 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 STMND1H3BQB6 276 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 CLDN17P56750 224 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 TMEM31Q5JXX7 168 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 OR51A4Q8NGJ6 313 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 POMT2Q9UKY4 750 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 NTNG1Q9Y2I2 539 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 ZNF587BE7ETH6 402 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 PLGLAQ15195 96 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 SLC23A1Q9UHI7 598 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 NSG1A0A0A6YYJ2 146 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 M0R082 166 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 DCTN6O00399 190 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 CBR1P16152 277 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 PHLDA2Q53GA4 152 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 GCNT2Q8N0V5 402 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 PPP1R1CQ8WVI7 109 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 WDR81Q562E7 1941 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 TLCD2A6NGC4 264 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 ZFP92A6NM28 416 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 STK11Q15831 433 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 RPUSD3Q6P087 351 aaKnown RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 TMEFF1Q8IYR6 380 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 ARIH2OSQ8N7S6 290 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 NLGN4YQ8NFZ3 816 aaPredicted RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 TOX2Q96NM4 488 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 NKX2-4Q9H2Z4 354 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 PLEKHF2Q9H8W4 249 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 LRIT1Q9P2V4 623 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 PTRH2Q9Y3E5 179 aaKnown RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 ZNF724A8MTY0 619 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 APOBEC1P41238 236 aaKnown RBP12.04□□□□□ -0.48
SNED1-201ENST00000310397 BAXQ07812 192 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 ZNF485Q8NCK3 441 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 SPHK1Q9NYA1 384 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 PIGLQ9Y2B2 252 aa12.04□□□□□ -0.48
SNED1-201ENST00000310397 FITM1A5D6W6 292 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 OR5K3A6NET4 321 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 MPPED1O15442 326 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 TSPAN12O95859 305 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 OR13C7P0DN81 318 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 UBE2IP63279 158 aaKnown RBP12.03□□□□□ -0.48
SNED1-201ENST00000310397 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 LANCL3Q6ZV70 420 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 RHOUQ7L0Q8 258 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 COL16A1Q07092 1604 aaPredicted RBP12.03□□□□□ -0.48
SNED1-201ENST00000310397 CTSLP07711 333 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 GNB3P16520 340 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 GJA4P35212 333 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZNF750Q32MQ0 723 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ARRDC3Q96B67 414 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZDHHC5Q9C0B5 715 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 AQP8O94778 261 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ALOX5APP20292 161 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZNF385BQ569K4 471 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 THEM4Q5T1C6 240 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 STAC2Q6ZMT1 411 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 LYG2Q86SG7 212 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 DMBX1Q8NFW5 382 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 PHOSPHO2Q8TCD6 241 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 EDAQ92838 391 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 IL20Q9NYY1 176 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CCDC85CA6NKD9 419 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 BHLHE40O14503 412 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 BCL2L11O43521 198 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 SLC2A10O95528 541 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZNF85Q03923 595 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZNF425Q6IV72 752 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ZNF705AQ6ZN79 300 aaPredicted RBP12.03□□□□□ -0.48
SNED1-201ENST00000310397 PPP1R3BQ86XI6 285 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CSF3RQ99062 836 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CHRNA9Q9UGM1 479 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 PRELID3BQ9Y3B1 194 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 LOC107986453A0A1B0GWG9 222 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CYTIPO60759 359 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 TUSC2O75896 110 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 CRYBB2P43320 205 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ELAVL1Q15717 326 aaKnown RBP12.03□□□□□ -0.48
SNED1-201ENST00000310397 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 IL34Q6ZMJ4 242 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
SNED1-201ENST00000310397 CCSO14618 274 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
SNED1-201ENST00000310397 ISG20L2Q9H9L3 353 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms