RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 DPP4P27487 766 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 NUBP1P53384 320 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 MCATQ8IVS2 390 aaKnown RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 APMAPQ9HDC9 416 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 ENTPD2Q9Y5L3 495 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 GPR179Q6PRD1 2367 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 ADAM10O14672 748 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 SNRNP70P08621 437 aaKnown RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 KCNJ3P48549 501 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 PPT1P50897 306 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 CCR5P51681 352 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 NSDHLQ15738 373 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 PDSS1Q5T2R2 415 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 RNLSQ5VYX0 342 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 OVCH1Q7RTY7 1134 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 SPAG16Q8N0X2 631 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 MARCH1Q8TCQ1 289 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 TOMM40LQ969M1 308 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 SFTPDP35247 375 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF273Q14593 569 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF704Q6ZNC4 412 aaPredicted RBP13.16□□□□□ -0.3
PTPN9-201ENST00000306726 TMPPEQ6ZT21 453 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 SLC16A13Q7RTY0 426 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 MIB2Q96AX9 1013 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 MRGPRX1Q96LB2 322 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 DPYSL5Q9BPU6 564 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 PARPBPQ9NWS1 579 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 KRBOX1C9JBD0 128 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF208O43345 1280 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 HTR2CP28335 458 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 BDKRB2P30411 391 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 CXCL12P48061 93 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 TLE1Q04724 770 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 PRICKLE4Q2TBC4 344 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF626Q68DY1 528 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 NR4A3Q92570 626 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 TEX101Q9BY14 249 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 WDR13Q9H1Z4 485 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 PLEKHA1Q9HB21 404 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 DUSP22Q9NRW4 184 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 RHBDD3Q9Y3P4 386 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 LSM5Q9Y4Y9 91 aaKnown RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 HEBP2Q9Y5Z4 205 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ANKRD20A5PA0PJZ0 165 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 HRH1P35367 487 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ACAA2P42765 397 aaKnown RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 CLINT1Q14677 625 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 NR0B2Q15466 257 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 DEFB133Q30KQ1 61 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 CDH26Q8IXH8 852 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 LMX1AQ8TE12 382 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 FGF11Q92914 225 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 FAM221AA4D161 298 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 CTAG2O75638 210 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 GLSO94925 669 aaPredicted RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 PNPP00491 289 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 GFERP55789 205 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 DHRS2Q13268 280 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 FAM69BQ5VUD6 431 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 OR2W3Q7Z3T1 314 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 BVESQ8NE79 360 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 NANPQ8TBE9 248 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
PTPN9-201ENST00000306726 RPH3AQ9Y2J0 694 aaPredicted RBP13.15□□□□□ -0.3
PTPN9-201ENST00000306726 SEC14L5O43304 696 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 GABRG2P18507 467 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 COL9A1P20849 921 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 MLC1Q15049 377 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 PDCD1Q15116 288 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 ACKR1Q16570 336 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 MANEAQ5SRI9 462 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 CA13Q8N1Q1 262 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 OR14A16Q8NHC5 309 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF417Q8TAU3 575 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 RAB40AQ8WXH6 277 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 ISOC2Q96AB3 205 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 MESP1Q9BRJ9 268 aa13.14□□□□□ -0.31
PTPN9-201ENST00000306726 CSAG2Q9Y5P2 127 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms