RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 FAM118AQ9NWS6 357 aa19.39■□□□□ 0.69
HOXD4-201ENST00000306324 H2AFY2Q9P0M6 372 aaPredicted RBP19.39■□□□□ 0.69
HOXD4-201ENST00000306324 LOC100130705A0A1B0GUX0 176 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 PTHP01270 115 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 SLC2A5P22732 501 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 GSTT1P30711 240 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 CALCRP30988 508 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 KRTAP10-9P60411 292 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 RIPK1Q13546 671 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 SLC35D3Q5M8T2 416 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 ERI1Q8IV48 349 aaKnown RBP19.38■□□□□ 0.69
HOXD4-201ENST00000306324 SLC30A7Q8NEW0 376 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 IL17RDQ8NFM7 739 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 OR2AJ1Q8NGZ0 328 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 NRG4Q8WWG1 115 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 PLEK2Q9NYT0 353 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 NDRG4Q9ULP0 352 aaKnown RBP19.38■□□□□ 0.69
HOXD4-201ENST00000306324 SPG11Q96JI7 2443 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 DSCAMO60469 2012 aa19.38■□□□□ 0.69
HOXD4-201ENST00000306324 RAI1Q7Z5J4 1906 aaPredicted RBP19.37■□□□□ 0.69
HOXD4-201ENST00000306324 IGHV2OR16-5A0A0B4J2B6 119 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 SHISA9B4DS77 424 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 E9PQ18 207 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 RER1O15258 196 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 SGCEO43556 437 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 DOK2O60496 412 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 SPARCP09486 303 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 CCL2P13500 99 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 APLNRP35414 380 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 ENTPD1P49961 510 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 NXNL2Q5VZ03 156 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 GJC3Q8NFK1 279 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 AKAP1Q92667 903 aaKnown RBP eCLIP19.37■□□□□ 0.69
HOXD4-201ENST00000306324 NEUROG1Q92886 237 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 UBE2FQ969M7 185 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 PITX2Q99697 317 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 C1orf198Q9H425 327 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 UBTD1Q9HAC8 227 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 CYB5R1Q9UHQ9 305 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 KCNG2Q9UJ96 466 aa19.37■□□□□ 0.69
HOXD4-201ENST00000306324 ZNF593O00488 134 aaPredicted RBP19.36■□□□□ 0.69
HOXD4-201ENST00000306324 TMCC2O75069 709 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 CCNOP22674 350 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 STOMP27105 288 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 CDH11P55287 796 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 TBC1D28Q2M2D7 210 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 SLC18B1Q6NT16 456 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 OR6N2Q8NGY6 317 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 CYGBQ8WWM9 190 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 INTS14Q96SY0 518 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 TEAD3Q99594 435 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 ATP23Q9Y6H3 246 aa19.36■□□□□ 0.69
HOXD4-201ENST00000306324 SLC16A6O15403 523 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 HTR5AP47898 357 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 LCN1P1Q5VSP4 162 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 AADACL4Q5VUY2 407 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 TMEM154Q6P9G4 183 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 VASH1Q7L8A9 365 aaPredicted RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 GID4Q8IVV7 300 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 OR1J2Q8NGS2 313 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 LILRB1Q8NHL6 650 aaPredicted RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 TRUB1Q8WWH5 349 aaKnown RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 PLEKHF2Q9H8W4 249 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 CDH20Q9HBT6 801 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 GDF2Q9UK05 429 aaPredicted RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 ANKRD17O75179 2603 aaKnown RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 POLQO75417 2590 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 PSKH1P11801 424 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 GDI2P50395 445 aaKnown RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 GALK2Q01415 458 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 KEAP1Q14145 624 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 ZNF672Q499Z4 452 aaPredicted RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 CCDC92Q53HC0 331 aaPredicted RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 CFAP77Q6ZQR2 320 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 MEPCEQ7L2J0 689 aaKnown RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 DHRSXQ8N5I4 330 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 CISD1Q9NZ45 108 aaKnown RBP19.35■□□□□ 0.69
HOXD4-201ENST00000306324 DNAJC27Q9NZQ0 273 aa19.35■□□□□ 0.69
HOXD4-201ENST00000306324 LOC100509620A0A075B734 347 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 C5orf49A4QMS7 147 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 CCDC182A6NF36 153 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 SELENOFO60613 162 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 ZNF35P13682 527 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 NAA10P41227 235 aaPredicted RBP19.34■□□□□ 0.69
HOXD4-201ENST00000306324 HIST1H3AP68431 136 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 RAB35Q15286 201 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 HIST2H3PS2Q5TEC6 136 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 KRT80Q6KB66 452 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 HIST2H3AQ71DI3 136 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 DPY19L4Q7Z388 723 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 DCXRQ7Z4W1 244 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 TIGD4Q8IY51 512 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 PAQR4Q8N4S7 273 aaPredicted RBP19.34■□□□□ 0.69
HOXD4-201ENST00000306324 NRGNQ92686 78 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 MARCH7Q9H992 704 aa19.34■□□□□ 0.69
HOXD4-201ENST00000306324 SLC22A31A6NKX4 558 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 HS3ST1O14792 307 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 SYNGR3O43761 229 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 MRPL3P09001 348 aaKnown RBP19.33■□□□□ 0.68
HOXD4-201ENST00000306324 TEX30Q5JUR7 227 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms