RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF17P17021 662 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 NBL1P41271 181 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SRP9P49458 86 aaKnown RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 MLLT11Q13015 90 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CLDN22Q8N7P3 220 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CASTOR1Q8WTX7 329 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 APOBEC3DQ96AK3 386 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 FUZQ9BT04 418 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 NELFAQ9H3P2 528 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ITGB1BP2Q9UKP3 347 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 A4GNTQ9UNA3 340 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 AHRRA9YTQ3 701 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 BHLHE40O14503 412 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 IMPA2O14732 288 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ATG12O94817 140 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 IFNA2P01563 188 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 IGFBP1P08833 259 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 PRSS3P35030 304 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 CFHR1Q03591 330 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 LTC4SQ16873 150 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SPATA46Q5T0L3 261 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 PYHIN1Q6K0P9 492 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM185AQ8NFB2 350 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 SLC26A1Q9H2B4 701 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF696Q9H7X3 374 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 AKIRIN1Q9H9L7 192 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-202ENST00000306042 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 ERVK13-1Q9NX77 482 aa8.31□□□□□ -1.08
PTPRE-202ENST00000306042 AHCYL1O43865 530 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 MECP2P51608 486 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SNRPGP62308 76 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM205Q6UW68 189 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ENTHD1Q8IYW4 607 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF615Q8N8J6 731 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF441Q8N8Z8 693 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 PRSS33Q8NF86 280 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ST6GALNAC5Q9BVH7 336 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 FUNDC2Q9BWH2 189 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SLC22A4Q9H015 551 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SIAEQ9HAT2 523 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 DIMT1Q9UNQ2 313 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 AMDHD2Q9Y303 409 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 UBE2J1Q9Y385 318 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 PIKFYVEQ9Y2I7 2098 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 HSPB6O14558 160 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TOR1AO14656 332 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 UGT2B10P36537 528 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 RPS27P42677 84 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TBCEQ15813 527 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TMPRSS11FQ6ZWK6 438 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 KANSL1Q7Z3B3 1105 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ZAR1Q86SH2 424 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 OR51E1Q8TCB6 317 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 EMG1Q92979 244 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TAS2R16Q9NYV7 291 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 MRPS28Q9Y2Q9 187 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SMIM10L1P0DMW3 83 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 EDDM3AQ14507 147 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 PPA1Q15181 289 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 RTL6Q6ICC9 239 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 CMTM1Q8IZ96 169 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 RHOXF1Q8NHV9 184 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SMIM10Q96HG1 83 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM59Q9BXS4 323 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SYNPO2LQ9H987 977 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 PARD6AQ9NPB6 346 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 MSRB2Q9Y3D2 182 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 A0A0X1KG70 313 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 HLA-HP01893 362 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF93P35789 620 aaPredicted RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 AKR1C2P52895 323 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ALKBH6Q3KRA9 238 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 EXOSC6Q5RKV6 272 aaKnown RBP8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SCCPDHQ8NBX0 429 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 SLC30A7Q8NEW0 376 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 GPR32P1Q8NGA4 272 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 OR1F12Q8NHA8 337 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 PAQR8Q8TEZ7 354 aa8.3□□□□□ -1.08
PTPRE-202ENST00000306042 ARRDC5A6NEK1 342 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SPRY3O43610 288 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF780AO75290 641 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 RBP2P50120 134 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 FXYD4P59646 89 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SKP2Q13309 424 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SNTB2Q13425 540 aaKnown RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SLC22A24Q8N4F4 322 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ABHD3Q8WU67 409 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 TOMM40LQ969M1 308 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ISOC1Q96CN7 298 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 RRNAD1Q96FB5 475 aaKnown RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 REEP6Q96HR9 211 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 CMSS1Q9BQ75 279 aaKnown RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SYT3Q9BQG1 590 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms