RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TMEM52BQ4KMG9 183 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 WDR38Q5JTN6 314 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 EXOSC6Q5RKV6 272 aaKnown RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 FAM219AQ8IW50 185 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 OR8D2Q9GZM6 311 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 PRTFDC1Q9NRG1 225 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 LRIT1Q9P2V4 623 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 VWA8A3KMH1 1905 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 POM121BA6NF01 834 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 OR2T1O43869 369 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 APBB3O95704 486 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TACR3P29371 465 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 IL12BP29460 328 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 EMP2P54851 167 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 CTAG1AP78358 180 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 RBMS3Q6XE24 437 aaKnown RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 Q6ZRG5 221 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 C12orf40Q86WS4 652 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 PRSS58Q8IYP2 241 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 HHIPL1Q96JK4 782 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TIMM29Q9BSF4 260 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SEC11CQ9BY50 192 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TBL1XR1Q9BZK7 514 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF701Q9NV72 531 aaPredicted RBP11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SERTAD3Q9UJW9 196 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 HCFC2Q9Y5Z7 792 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 PLXNA3P51805 1871 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 BORCS7-ASMTA0A0B4J1R7 106 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 TMEM269A0A1B0GVZ9 245 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 DCTN6O00399 190 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 RAB5CP51148 216 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF345Q14585 488 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 CLEC1AQ8NC01 280 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SEH1LQ96EE3 360 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SPACA1Q9HBV2 294 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 SLC22A7Q9Y694 548 aa11.81□□□□□ -0.52
TRIM35-201ENST00000305364 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 A0A0A6YYH2 397 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 C9orf170A2RU37 121 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 A6NJ64 397 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 YKT6O15498 198 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 TIMP1P01033 207 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 WBP2NLQ6ICG8 309 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 IL34Q6ZMJ4 242 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 OR9A4Q8NGU2 314 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 CMBLQ96DG6 245 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 MAFFQ9ULX9 164 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 KPTNQ9Y664 436 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 TET1Q8NFU7 2136 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 PQLC2LA1A4F0 135 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ARPC3O15145 178 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF44P15621 663 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ABOP16442 354 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 AKT2P31751 481 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 NDUFA6P56556 154 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 SSBP1Q04837 148 aaKnown RBP11.8□□□□□ -0.52
TRIM35-201ENST00000305364 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 MDGA2Q7Z553 956 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 GVQW1Q8N7I0 195 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 SLC17A9Q9BYT1 436 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ALX4Q9H161 411 aaPredicted RBP11.8□□□□□ -0.52
TRIM35-201ENST00000305364 KCNE5Q9UJ90 142 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 K7EPK0 472 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 CSNK2A1P68400 391 aaPredicted RBP11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ZNF440Q8IYI8 595 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 FAM71E2Q8N5Q1 922 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 ZNRF4Q8WWF5 429 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 WDR77Q9BQA1 342 aaPredicted RBP11.8□□□□□ -0.52
TRIM35-201ENST00000305364 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
TRIM35-201ENST00000305364 A0A0A6YYC8 382 aaPredicted RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 OR4C45A6NMZ5 311 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 C4orf47A7E2U8 309 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 I3L1I5 382 aaPredicted RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 RNGTTO60942 597 aaKnown RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 DAOP14920 347 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 MST1P26927 711 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 RPS21P63220 83 aaKnown RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 KIAA0141Q14154 515 aaPredicted RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 CHRFAM7AQ494W8 412 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 PRR22Q8IZ63 422 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 PPP1R14AQ96A00 147 aa11.79□□□□□ -0.52
TRIM35-201ENST00000305364 LMF2Q9BU23 707 aaKnown RBP11.79□□□□□ -0.52
TRIM35-201ENST00000305364 KCNK7Q9Y2U2 307 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms