RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CNR1P21554 472 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 SLC6A1P30531 599 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 DNASE1L1P49184 302 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 ART1P52961 327 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 SUCLG1P53597 346 aaKnown RBP17.26■□□□□ 0.35
HOXC4-201ENST00000303406 GPR176Q14439 515 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 SLC36A2Q495M3 483 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 HES3Q5TGS1 186 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CREB3L2Q70SY1 520 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 GLRX5Q86SX6 157 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 BEST3Q8N1M1 668 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 ADAMTS17Q8TE56 1095 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 CREB3L1Q96BA8 519 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 SLC17A5Q9NRA2 495 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 FAM206AQ9NX38 181 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 FBXL3Q9UKT7 428 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 GTF2A1LQ9UNN4 478 aa17.26■□□□□ 0.35
HOXC4-201ENST00000303406 A0A0J9YW62 118 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 LRRC3CA6NJW4 275 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 CENPXA8MT69 81 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 ZNF878C9JN71 531 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 G3V3Y1 287 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 SLC17A2O00624 439 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 MAS1P04201 325 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 QDPRP09417 244 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 CLDN6P56747 220 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 CLDN17P56750 224 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 RAC3P60763 192 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 LSM6P62312 80 aaKnown RBP17.25■□□□□ 0.35
HOXC4-201ENST00000303406 BTG1P62324 171 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 DYRK1AQ13627 763 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 TOMM20Q15388 145 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 BCL2L15Q5TBC7 163 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 FAM166AQ6J272 317 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 SUMF1Q8NBK3 374 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 OR2AJ1Q8NGZ0 328 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 PNPLA2Q96AD5 504 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 ZNF275Q9NSD4 429 aaPredicted RBP17.25■□□□□ 0.35
HOXC4-201ENST00000303406 GLTPQ9NZD2 209 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 GDF2Q9UK05 429 aaPredicted RBP17.25■□□□□ 0.35
HOXC4-201ENST00000303406 LHFPL6Q9Y693 200 aa17.25■□□□□ 0.35
HOXC4-201ENST00000303406 A0A1B0GVC2 190 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 LOC107986453A0A1B0GWG9 222 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 A6NIN4 97 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 LINC01387J3KSC0 135 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 CSNK1A1P48729 337 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 ODF4Q2M2E3 257 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 PLA1AQ53H76 456 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 RSBN1Q5VWQ0 802 aaPredicted RBP17.24■□□□□ 0.35
HOXC4-201ENST00000303406 GLT8D1Q68CQ7 371 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 LRFN4Q6PJG9 635 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 ELMOD2Q8IZ81 293 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 TOMM5Q8N4H5 51 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 OR9K2Q8NGE7 335 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 SYNPRQ8TBG9 265 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 THOC3Q96J01 351 aaKnown RBP17.24■□□□□ 0.35
HOXC4-201ENST00000303406 CENPMQ9NSP4 180 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 ABI3Q9P2A4 366 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 CDV3Q9UKY7 258 aaKnown RBP17.24■□□□□ 0.35
HOXC4-201ENST00000303406 CLEC4AQ9UMR7 237 aa17.24■□□□□ 0.35
HOXC4-201ENST00000303406 ALPK2Q86TB3 2170 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 NPIPA2E9PIF3 369 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 NPIPA3F8WFD2 350 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 GABARAPH6UMI1 98 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
HOXC4-201ENST00000303406 ORC5O43913 435 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 CCNKO75909 580 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 DDOSTP39656 456 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 PSMA6P60900 246 aaKnown RBP17.23■□□□□ 0.35
HOXC4-201ENST00000303406 DGCR2P98153 550 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 ASPHD2Q6ICH7 369 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 DHRS13Q6UX07 377 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 ESPNLQ6ZVH7 1005 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 PIP4P1Q86T03 277 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 OR10S1Q8NGN2 331 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 OR2M2Q96R28 347 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 SEC61A2Q9H9S3 476 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 ZFP64Q9NPA5 681 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 COPZ2Q9P299 210 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 NLKQ9UBE8 527 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 NUFIP1Q9UHK0 495 aaKnown RBP17.23■□□□□ 0.35
HOXC4-201ENST00000303406 BOKQ9UMX3 212 aaPredicted RBP17.23■□□□□ 0.35
HOXC4-201ENST00000303406 COL6A3P12111 3177 aa17.23■□□□□ 0.35
HOXC4-201ENST00000303406 A0A0G2JMM0 328 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 A0A1W2PPB8 328 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 A0A1W2PRS3 328 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 KIR3DP1A8MWS1 328 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 ECDO95905 644 aaPredicted RBP17.22■□□□□ 0.35
HOXC4-201ENST00000303406 KLK2P20151 261 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CASRP41180 1078 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CAPZA1P52907 286 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CLDN12P56749 244 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 GABREP78334 506 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 RAB11BQ15907 218 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CARTPTQ16568 116 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CARD17Q5XLA6 110 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 CORO6Q6QEF8 472 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 TMEM123Q8N131 208 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 NKAIN3Q8N8D7 197 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 DTX3Q8N9I9 347 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms