RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ADAM8P78325 824 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 SQSTM1Q13501 440 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 MS4A18Q3C1V0 323 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 LRFN4Q6PJG9 635 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 C17orf107Q6ZR85 190 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 WDR5BQ86VZ2 330 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 OR2G2Q8NGZ5 317 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 MRPL48Q96GC5 212 aaKnown RBP19.66■□□□□ 0.74
TPM4-201ENST00000300933 METTL7AQ9H8H3 244 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 PFDN2Q9UHV9 154 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 TRAV8-7A0A075B6U6 113 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 IGKV1D-43A0A0B4J1Z2 117 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 DYRK1AQ13627 763 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 FCRLAQ7L513 359 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 CMTM4Q8IZR5 234 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 IFT46Q9NQC8 304 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 FTCDNL1E5RQL4 147 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 TGM6O95932 706 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 PNPP00491 289 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 PLATP00750 562 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 FBXO45P0C2W1 286 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 ADRA2CP18825 462 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 CAPZA2P47755 286 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 METTL11BQ5VVY1 283 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 OR7E24Q6IFN5 339 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 ATRAIDQ6UW56 229 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 SEZ6L2Q6UXD5 910 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 TFAP2EQ6VUC0 442 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 OR52I2Q8NH67 350 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 C7orf50Q9BRJ6 194 aaKnown RBP19.65■□□□□ 0.74
TPM4-201ENST00000300933 NPDC1Q9NQX5 325 aaPredicted RBP19.65■□□□□ 0.74
TPM4-201ENST00000300933 PPP4R1LQ9P1A2 415 aa19.65■□□□□ 0.74
TPM4-201ENST00000300933 PHF3Q92576 2039 aaKnown RBP19.64■□□□□ 0.74
TPM4-201ENST00000300933 ANXA2P2A6NMY6 339 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 PDCD5O14737 125 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 C4BPBP20851 252 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 CCKBRP32239 447 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 POU3F1Q03052 451 aaPredicted RBP19.64■□□□□ 0.73
TPM4-201ENST00000300933 LINC00346Q8IVM7 164 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 OTOSQ8NHW6 89 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 NUBPLQ8TB37 319 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 TMEM234Q8WY98 164 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 NAT6Q93015 286 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 MR1Q95460 341 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 DMRTA2Q96SC8 542 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 EXPH5Q8NEV8 1989 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 ANKUB1A6NFN9 424 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 MCRIP1C9JLW8 97 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 G3V3Y1 287 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 GPRIN2O60269 458 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 RPS15P62841 145 aaKnown RBP19.64■□□□□ 0.73
TPM4-201ENST00000300933 PLA2G7Q13093 441 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 C5orf34Q96MH7 638 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 DEFB126Q9BYW3 111 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 NOX3Q9HBY0 568 aa19.64■□□□□ 0.73
TPM4-201ENST00000300933 CCDC163A0A0D9SF12 145 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 A0A1W2PNR3 127 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 TUBAL3A6NHL2 446 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 KRBOX1C9JBD0 128 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 KHDRBS3O75525 346 aaKnown RBP19.63■□□□□ 0.73
TPM4-201ENST00000300933 ZFAND5O76080 213 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 SIX6O95475 246 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 APOC3P02656 99 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 CLDN6P56747 220 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 HLXQ14774 488 aaPredicted RBP19.63■□□□□ 0.73
TPM4-201ENST00000300933 WDR38Q5JTN6 314 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 CORO6Q6QEF8 472 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 C1orf210Q8IVY1 113 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 OR52B4Q8NGK2 314 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 TCF7L1Q9HCS4 588 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 IGLV1-36A0A0B4J1U3 117 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 OR4C45A6NMZ5 311 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 IFITM5A6NNB3 132 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 KDM4BO94953 1096 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 ZXDAP98168 799 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 STAC2Q6ZMT1 411 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 OVCH2Q7RTZ1 564 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 TMEM106AQ96A25 262 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 ABRACLQ9P1F3 81 aa19.63■□□□□ 0.73
TPM4-201ENST00000300933 A8MXK9 166 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 D6RAR5 112 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 KIR3DL2P43630 455 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 TLE3Q04726 772 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 RASL10BQ96S79 203 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 ARL6Q9H0F7 186 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 KLK2P20151 261 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 HOXA6P31267 233 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 PTGDSP41222 190 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 Q499Y3 187 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 MRPL14Q6P1L8 145 aaKnown RBP19.62■□□□□ 0.73
TPM4-201ENST00000300933 NUP54Q7Z3B4 507 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 OR5L2Q8NGL0 311 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 OR10Z1Q8NGY1 313 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 RPS4Y2Q8TD47 263 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 LDAHQ9H6V9 325 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 GPR160Q9UJ42 338 aa19.62■□□□□ 0.73
TPM4-201ENST00000300933 RPH3AQ9Y2J0 694 aaPredicted RBP19.62■□□□□ 0.73
TPM4-201ENST00000300933 PTRH2Q9Y3E5 179 aaKnown RBP19.62■□□□□ 0.73
TPM4-201ENST00000300933 V9GY05 133 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms