RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SFXN5Q8TD22 340 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 SLC25A44Q96H78 314 aaPredicted RBP13.46□□□□□ -0.25
SPIDR-201ENST00000297423 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 A0A0A6YYH2 397 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 A6NJ64 397 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 TNFSF12O43508 249 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 EMDP50402 254 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 ACTBL2Q562R1 376 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 OR2B11Q5JQS5 317 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 ULK3Q6PHR2 472 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 PGAP1Q75T13 922 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 OR52E1Q8NGJ3 308 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
SPIDR-201ENST00000297423 NID1P14543 1247 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 ZNF44P15621 663 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-201ENST00000297423 METTL27Q8N6F8 245 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-201ENST00000297423 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 SSX3Q99909 188 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 WDR76Q9H967 626 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 TNFSF18Q9UNG2 199 aa13.46□□□□□ -0.26
SPIDR-201ENST00000297423 MEX3AA1L020 520 aaKnown RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 VEGFDO43915 354 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 SLC2A5P22732 501 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 OR3A2P47893 321 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 ZNF679Q8IYX0 411 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 RNF113BQ8IZP6 322 aaKnown RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 NAXEQ8NCW5 288 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 OR5M8Q8NGP6 311 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 WDR34Q96EX3 536 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 CACNA1GO43497 2377 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 AGR2O95994 175 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 PVRP15151 417 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 TYRP1P17643 537 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 CTHP32929 405 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 PJVKQ0ZLH3 352 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 MEP1BQ16820 701 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 C4orf17Q53FE4 359 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 TMEM35AQ53FP2 167 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 PAPD4Q6PIY7 484 aaKnown RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 TMEM64Q6YI46 380 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 Q6ZRG5 221 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 SYS1Q8N2H4 156 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 LCORQ96JN0 433 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 GPER1Q99527 375 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 S1PR5Q9H228 398 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 FRRS1LQ9P0K9 344 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 PCOLCE2Q9UKZ9 415 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 KLHDC2Q9Y2U9 406 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 SMIM6P0DI80 62 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 RCC1P18754 421 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 NR0B2Q15466 257 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 COL13A1Q5TAT6 717 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 OR2L3Q8NG85 312 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 OR10H5Q8NGA6 315 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 OR14K1Q8NGZ2 314 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
SPIDR-201ENST00000297423 ZNF700Q9H0M5 742 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 PRDM7Q9NQW5 492 aa13.45□□□□□ -0.26
SPIDR-201ENST00000297423 EIF1BO60739 113 aaKnown RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 ITGA5P08648 1049 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 RNH1P13489 461 aaKnown RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 ABOP16442 354 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 EIF1P41567 113 aaKnown RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 IRF4Q15306 451 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 SLAMF9Q96A28 289 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 UNKLQ9H9P5 680 aaKnown RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 A0A1W2PPE2 198 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 WNT11O96014 354 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 ERV3-1Q14264 604 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 SSX2Q16385 188 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 ALG10Q5BKT4 473 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 NKAIN2Q5VXU1 208 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 OR5AP2Q8NGF4 316 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 OR2A1Q8NGT9 310 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 VOPP1Q96AW1 172 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 TCEAL2Q9H3H9 227 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 TAS2R4Q9NYW5 299 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 EPHA6Q9UF33 1036 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 PQLC2LA1A4F0 135 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 RENP00797 406 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 HRH1P35367 487 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 RPS21P63220 83 aaKnown RBP13.44□□□□□ -0.26
SPIDR-201ENST00000297423 DHODHQ02127 395 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 DEFB110Q30KQ9 67 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 PPP1R3BQ86XI6 285 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 PLEKHA1Q9HB21 404 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 UFSP2Q9NUQ7 469 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
SPIDR-201ENST00000297423 A0A1W2PQU0 124 aa13.43□□□□□ -0.26
SPIDR-201ENST00000297423 KLK3P07288 261 aaPredicted RBP13.43□□□□□ -0.26
SPIDR-201ENST00000297423 FOSL2P15408 326 aa13.43□□□□□ -0.26
SPIDR-201ENST00000297423 HTR2CP28335 458 aa13.43□□□□□ -0.26
SPIDR-201ENST00000297423 CD1CP29017 333 aa13.43□□□□□ -0.26
SPIDR-201ENST00000297423 CAMLGP49069 296 aa13.43□□□□□ -0.26
SPIDR-201ENST00000297423 ELOCQ15369 112 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms