RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TRAF3IP2O43734 574 aaPredicted RBP8.14□□□□□ -1.11
PDPN-201ENST00000294489 PNPP00491 289 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 H2BFMP0C1H6 154 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 PGA4P0DJD7 388 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 PGA3P0DJD8 388 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 CALCBP10092 127 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 CSNK2A1P68400 391 aaPredicted RBP8.14□□□□□ -1.11
PDPN-201ENST00000294489 RTP5Q14D33 572 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 LINC00346Q8IVM7 164 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 UBQLNLQ8IYU4 475 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 MDS2Q8NDY4 140 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 OR51A4Q8NGJ6 313 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 OR10AC1Q8NH08 325 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 C11orf40Q8WZ69 217 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 GFI1Q99684 422 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 CENPMQ9NSP4 180 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 ANKRD10Q9NXR5 420 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 DLL3Q9NYJ7 618 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 DHDHQ9UQ10 334 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 SLC22A13Q9Y226 551 aa8.14□□□□□ -1.11
PDPN-201ENST00000294489 A0A1W2PPL8 197 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 PINLYPA6NC86 204 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 ZNF814B7Z6K7 855 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 EEF1E1O43324 174 aaKnown RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 VAMP5O95183 116 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 MAS1P04201 325 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 KIR2DL3P43628 341 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 DNASE1L1P49184 302 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 MMP15P51511 669 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 AGFG1P52594 562 aaKnown RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 ZNF133P52736 654 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 CD300CQ08708 224 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 HYAL4Q2M3T9 481 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 CATSPERDQ86XM0 798 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 ST7LQ8TDW4 575 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 MCHR2Q969V1 340 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 ZFP3Q96NJ6 502 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 FAM173AQ9BQD7 235 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 NAA11Q9BSU3 229 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 C1orf198Q9H425 327 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 RNF121Q9H920 327 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 SEC61A2Q9H9S3 476 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 CKLFQ9UBR5 152 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 EMC9Q9Y3B6 208 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 PCDHGA9Q9Y5G4 932 aaKnown RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 A0A0C4DFX4 3053 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 MEIOCA2RUB1 952 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 H3BSH0 61 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 MFGE8Q08431 387 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 RSBN1Q5VWQ0 802 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 CARD17Q5XLA6 110 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 KLHL24Q6TFL4 600 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 ZNF704Q6ZNC4 412 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 FCRLAQ7L513 359 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 LRRTM1Q86UE6 522 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 DUSP18Q8NEJ0 188 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 RNF133Q8WVZ7 376 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 S100A16Q96FQ6 103 aaKnown RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 ZFP64Q9NPA5 681 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 FBXO9Q9UK97 447 aaPredicted RBP8.13□□□□□ -1.11
PDPN-201ENST00000294489 POLR1DQ9Y2S0 133 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 ETV7Q9Y603 341 aa8.13□□□□□ -1.11
PDPN-201ENST00000294489 TRAV8-7A0A075B6U6 113 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 TMEM269A0A1B0GVZ9 245 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CENPXA8MT69 81 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 HPNP05981 417 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 RFPL3SP0C7P2 107 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ADRA2CP18825 462 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 GFRA1P56159 465 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OC90Q02509 493 aaPredicted RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 ABHD17BQ5VST6 288 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CORO6Q6QEF8 472 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 KRT74Q7RTS7 529 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 GGNQ86UU5 652 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CMTM4Q8IZR5 234 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OR2AJ1Q8NGZ0 328 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 TRIM63Q969Q1 353 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ADGRG7Q96K78 797 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 SIGLEC12Q96PQ1 595 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 LRFN1Q9P244 771 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ABI3Q9P2A4 366 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CYB5R1Q9UHQ9 305 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OR52A1Q9UKL2 312 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 HHLA2Q9UM44 414 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CCNKO75909 580 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 GLSO94925 669 aaPredicted RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 WNT11O96014 354 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 GUCA1AP43080 201 aaPredicted RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 SUCLG1P53597 346 aaKnown RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 CLDN12P56749 244 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CLDN17P56750 224 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 SCAND1P57086 179 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 TOMM5Q8N4H5 51 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OR2M7Q8NG81 312 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 SLAMF6Q96DU3 332 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 UTP23Q9BRU9 249 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms