RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LEG1Q6P5S2 330 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 NHLRC1Q6VVB1 395 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 STX12Q86Y82 276 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 OR4Q3Q8NH05 313 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 OR10D3Q8NH80 312 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ASB10Q8WXI3 467 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 UFD1Q92890 307 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 UFSP2Q9NUQ7 469 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 NDRG3Q9UGV2 375 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 GPR52Q9Y2T5 361 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM230AA0A1W2PPH8 454 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 FIGNL2A6NMB9 653 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF724A8MTY0 619 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 MTRF1O75570 445 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 CLIC3O95833 236 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 F13BP05160 661 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 GABRR1P24046 479 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 SHC1P29353 583 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 IDH3GP51553 393 aaPredicted RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 SUCLG1P53597 346 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 GABARAPL2P60520 117 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ISL1P61371 349 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 NADK2Q4G0N4 442 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC16A14Q7RTX9 510 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 BATF2Q8N1L9 274 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM26EQ8N5C1 309 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 LRRC17Q8N6Y2 441 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 ZFP41Q8N8Y5 198 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 EXD3Q8N9H8 876 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 IL17RDQ8NFM7 739 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 HTRA1Q92743 480 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 HDAC2Q92769 488 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TIMP4Q99727 224 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 SRXN1Q9BYN0 137 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 B3GAT1Q9P2W7 334 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 RNF6Q9Y252 685 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 RCE1Q9Y256 329 aa7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 NOSIPQ9Y314 301 aaKnown RBP7.51□□□□□ -1.21
PTPDC1-201ENST00000288976 FN1P02751 2386 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 C13orf42A0A1B0GVH6 325 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 IRGMA1A4Y4 181 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 A1L4Q6 167 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 HSPB6O14558 160 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 AIREO43918 545 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 TIMM8AO60220 97 aaPredicted RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 DOK2O60496 412 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SEC14L2O76054 403 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ABHD16AO95870 558 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC25A1P53007 311 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 RPL27P61353 136 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PMP22Q01453 160 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 C4orf46Q504U0 113 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SHFQ7M4L6 423 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 GID4Q8IVV7 300 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 GLB1L2Q8IW92 636 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ENTHD1Q8IYW4 607 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 GCNT2Q8N0V5 402 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 TSPAN32Q96QS1 320 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ALG12Q9BV10 488 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 TNFRSF19Q9NS68 423 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PLCXD1Q9NUJ7 323 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 EMC3Q9P0I2 261 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 RPL36Q9Y3U8 105 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ENSAO43768 121 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 HTR3BO95264 441 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 GYPBP06028 91 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM87AP0C7U9 286 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 AKR1C2P52895 323 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 KLHL22Q53GT1 634 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC35D3Q5M8T2 416 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 C1QL3Q5VWW1 255 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 KLHL36Q8N4N3 616 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 RHOXF1Q8NHV9 184 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 RNF128Q8TEB7 428 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PIGCQ92535 297 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 FBXO17Q96EF6 278 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ETAA1Q9NY74 926 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SPEGQ15772 3267 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 CCDC182A6NF36 153 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 AHRRA9YTQ3 701 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 WDR1O75083 606 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PIPP12273 146 aaPredicted RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 AQP2P41181 271 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF133P52736 654 aaPredicted RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 CLDN15P56746 228 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 EDDM3BP56851 147 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 SEC61A1P61619 476 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 PYHIN1Q6K0P9 492 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 NIPAL3Q6P499 406 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 THSD4Q6ZMP0 1018 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 Q6ZPB1 254 aaPredicted RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM17Q86X19 198 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 INTS12Q96CB8 462 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 TRIB1Q96RU8 372 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 BCO1Q9HAY6 547 aa7.5□□□□□ -1.21
PTPDC1-201ENST00000288976 KLHL13Q9P2N7 655 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms