RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PRODH2Q9UF12 536 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 MTCL1Q9Y4B5 1905 aaKnown RBP12.12□□□□□ -0.47
SCAF4-201ENST00000286835 NKX2-2O95096 273 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 PRH1P02810 166 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 AKR1C3P42330 323 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 OR1D4P47884 311 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 NKAPLQ5M9Q1 402 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 C1QL3Q5VWW1 255 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 NUP54Q7Z3B4 507 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
SCAF4-201ENST00000286835 UBQLN4Q9NRR5 601 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 HHLA2Q9UM44 414 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 RP1P56715 2156 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 UNC13CQ8NB66 2214 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 HMSDA8MTL9 139 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 ZNF878C9JN71 531 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 STK17BO94768 372 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 BAMBIQ13145 260 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 FCRL6Q6DN72 434 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 ANKRD16Q6P6B7 361 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 GVQW1Q8N7I0 195 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 GFI1Q99684 422 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 B9D1Q9UPM9 204 aa12.12□□□□□ -0.47
SCAF4-201ENST00000286835 C5orf67F2Z3F1 127 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CTSBP07858 339 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 BDKRB2P30411 391 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 MAMDC2Q7Z304 686 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 HSD17B13Q7Z5P4 300 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SLC37A2Q8TED4 501 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ZC3H10Q96K80 434 aaKnown RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 GAREM1Q9H706 876 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SERTAD3Q9UJW9 196 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 H3BML4 177 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CARD17Q5XLA6 110 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 NAXDQ8IW45 347 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 FGGYQ96C11 551 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ZDHHC12Q96GR4 267 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 AMELYQ99218 206 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SLC25A21Q9BQT8 299 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 COPS7AQ9UBW8 275 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SIT1Q9Y3P8 196 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CSAG2Q9Y5P2 127 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 EPOPA6NHQ4 379 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 NME2P22392 152 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 HSD11B1P28845 292 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 GUCA1AP43080 201 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 NPY4RP50391 375 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ZP2Q05996 745 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 PMPCAQ10713 525 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 PRRT1Q99946 306 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 FAM60AQ9NP50 221 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 KIF26BQ2KJY2 2108 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 WNT11O96014 354 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 SLC2A1P11166 492 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 TFF2Q03403 129 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 CHAF1BQ13112 559 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
SCAF4-201ENST00000286835 COA3Q9Y2R0 106 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-201ENST00000286835 ARPC3O15145 178 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ZNF74Q16587 644 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 C11orf87Q6NUJ2 197 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 TMEM151BQ8IW70 566 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 NT5CQ8TCD5 201 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ELP5Q8TE02 316 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-201ENST00000286835 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 SYT7O43581 403 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 UTS2O95399 124 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 WDPCPO95876 746 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 SERPINA5P05154 406 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 FLI1Q01543 452 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-201ENST00000286835 GLO1Q04760 184 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 PDZK1IP1Q13113 114 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 CD226Q15762 336 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ACKR1Q16570 336 aa12.1□□□□□ -0.47
SCAF4-201ENST00000286835 PAN3Q58A45 887 aaKnown RBP12.1□□□□□ -0.47
SCAF4-201ENST00000286835 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms