RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SPACA7Q96KW9 195 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 CNTNAP3BQ96NU0 1288 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 CCDC3Q9BQI4 270 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 SLC25A21Q9BQT8 299 aaPredicted RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 SEC11CQ9BY50 192 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TLNRD1Q9H1K6 362 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 UBQLN4Q9NRR5 601 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 HRASLS2Q9NWW9 162 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 HEATR5AQ86XA9 2040 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 F5H0A9 414 aaPredicted RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 CD3DP04234 171 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ZNF806P0C7X5 589 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 PTGFRP43088 359 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 HSD17B7P56937 341 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 CTXN1P60606 82 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 EGR4Q05215 589 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TAF13Q15543 124 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 MESTQ5EB52 335 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TMEM71Q6P5X7 295 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TMEM184AQ6ZMB5 413 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 OOSP2Q86WS3 158 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 C16orf52Q8NHV5 167 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 PTX4Q96A99 478 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 DGAT2Q96PD7 388 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TSPAN32Q96QS1 320 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 POTEKPQ9BYX7 375 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 OR10A5Q9H207 317 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 CLEC1BQ9P126 229 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 LAMP5Q9UJQ1 280 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 TINAGQ9UJW2 476 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 OR2AT4A6NND4 320 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 AKR7A3O95154 331 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 NSA2O95478 260 aaKnown RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 RENP00797 406 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 FOLR2P14207 255 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ABOP16442 354 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 PRSS3P35030 304 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 KIR3DL2P43630 455 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 HAAOP46952 286 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 SLC6A8P48029 635 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ZFP82Q8N141 532 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 GTPBP8Q8N3Z3 284 aaPredicted RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 OTOSQ8NHW6 89 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 ARL5BQ96KC2 179 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 INTS14Q96SY0 518 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 LPAR4Q99677 370 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 GPR27Q9NS67 375 aa9.35□□□□□ -0.91
SKA1-201ENST00000285116 CDV3Q9UKY7 258 aaKnown RBP9.35□□□□□ -0.91
SKA1-201ENST00000285116 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CACNA1GO43497 2377 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 A0A1B0GVT2 93 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 HRKO00198 91 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CLDN4O14493 209 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 EIF1BO60739 113 aaKnown RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 WNT11O96014 354 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 ACTL6AO96019 429 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 IGHMP01871 453 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 HOXB2P14652 356 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 FOSL1P15407 271 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 AKT2P31751 481 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 LTBRP36941 435 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CASRP41180 1078 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 EIF1P41567 113 aaKnown RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 NPBWR1P48145 328 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CAPZA1P52907 286 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 ECH1Q13011 328 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 PLA2G7Q13093 441 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 BEX5Q5H9J7 111 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 NDUFAF7Q7L592 441 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TAF8Q7Z7C8 310 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 GABRG1Q8N1C3 465 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TMEM106AQ96A25 262 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 MOGAT1Q96PD6 335 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 OR8B4Q96RC9 309 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 PRTFDC1Q9NRG1 225 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 SLC22A11Q9NSA0 550 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 GRHPRQ9UBQ7 328 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TRAV18A0A075B6X5 111 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 H0Y8X5 98 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 SSX5O60225 188 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 FADS1O60427 444 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TNFP01375 233 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CD74P04233 296 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CD79AP11912 226 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 HLA-GP17693 338 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CD34P28906 385 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TAS2R19P59542 299 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 RPL18Q07020 188 aaKnown RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 INPP5JQ15735 1006 aaPredicted RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 RAB11BQ15907 218 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 YOD1Q5VVQ6 348 aaPredicted RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 SLC16A13Q7RTY0 426 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 C19orf47Q8N9M1 422 aaKnown RBP9.34□□□□□ -0.91
SKA1-201ENST00000285116 INO80EQ8NBZ0 244 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms