RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SLC25A21Q9BQT8 299 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 TXNIPQ9H3M7 391 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 MYOZ1Q9NP98 299 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 SOHLH2Q9NX45 425 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 KCNG2Q9UJ96 466 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 ING1Q9UK53 422 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 ZFYVE26Q68DK2 2539 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 ITPR1Q14643 2758 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 A0A1B0GTH9 108 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 MEN1O00255 615 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 TSPAN2O60636 221 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ICOSLGO75144 302 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 DDAH2O95865 285 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ITGA5P08648 1049 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 VSIG10L2P0DP72 767 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 PTHLHP12272 177 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 GP1BBP13224 206 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 CCKBRP32239 447 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 POLR2HP52434 150 aaKnown RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 MAP2K6P52564 334 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 C2orf76Q3KRA6 126 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 FAAP20Q6NZ36 180 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR2AK2Q8NG84 335 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR10AC1Q8NH08 325 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR6S1Q8NH40 331 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 DAZLQ92904 295 aaKnown RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF524Q96C55 264 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR8D2Q9GZM6 311 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 C1orf198Q9H425 327 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 CUTCQ9NTM9 273 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 MED11Q9P086 117 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 IGLV1-36A0A0B4J1U3 117 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 A8MVM7 634 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 F5H5P2 479 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR2T1O43869 369 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 RP2O75695 350 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR6A2O95222 327 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 GP1BAP07359 652 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 CRABP1P29762 137 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 DUSP3P51452 185 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 RIDAP52758 137 aaKnown RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 PNLIPRP2P54317 469 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 TAS2R19P59542 299 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 CCL7P80098 99 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 EBPQ15125 230 aaKnown RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ACKR1Q16570 336 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 NKAIN2Q5VXU1 208 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 HLA-DQA1Q5Y7H0 255 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 OGFOD3Q6PK18 319 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 TMPRSS9Q7Z410 1059 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 METTL27Q8N6F8 245 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 STK35Q8TDR2 534 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 SCARB1Q8WTV0 552 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 PTX4Q96A99 478 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF587Q96SQ5 575 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 PTDSS2Q9BVG9 487 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 APMAPQ9HDC9 416 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 RDH8Q9NYR8 311 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 ATXN7L1Q9ULK2 861 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-201ENST00000277198 DHDHQ9UQ10 334 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 SPEF1Q9Y4P9 236 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 KIF26BQ2KJY2 2108 aa11.59□□□□□ -0.55
C9orf3-201ENST00000277198 HEATR5AQ86XA9 2040 aa11.58□□□□□ -0.55
C9orf3-201ENST00000277198 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 IGHV5-51A0A0C4DH38 117 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 hCG_1807616A0A1W2PRN6 198 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 TCRBV16S1A1N1A0A5B0 115 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 OR6C76A6NM76 312 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 H0YC42 278 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 SUSD5O60279 629 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 PMS2P2O95744 297 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 WNT11O96014 354 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 LPLP06858 475 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 GTF2F2P13984 249 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 PPP3CBP16298 524 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 C14orf28Q4W4Y0 310 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM225Q6GV28 225 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 GRINAQ7Z429 371 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM229BQ8NBD8 167 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 OR6M1Q8NGM8 313 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 C8orf44Q96CB5 159 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 AMELYQ99218 206 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 TBL1XR1Q9BZK7 514 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF224Q9NZL3 707 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 SESN1Q9Y6P5 492 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 CHD6Q8TD26 2715 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 LOC105371267A0A1B0GV96 52 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 H3BMH7 237 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 H3BUI4 141 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 BET1O15155 118 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 NUDT21O43809 227 aaKnown RBP11.58□□□□□ -0.56
C9orf3-201ENST00000277198 AQP8O94778 261 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms