RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 ICMTO60725 284 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
HMGN3-201ENST00000275036 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 FAM157CP0CG43 387 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 HMGA2P52926 109 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
HMGN3-201ENST00000275036 VASH1Q7L8A9 365 aaPredicted RBP12.31□□□□□ -0.44
HMGN3-201ENST00000275036 GLB1L2Q8IW92 636 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 ARHGAP24Q8N264 748 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 ZNF540Q8NDQ6 660 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 OR4C15Q8NGM1 316 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 CLPTM1LQ96KA5 538 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 OR2J1Q9GZK6 312 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 POFUT1Q9H488 388 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 HINT3Q9NQE9 182 aaKnown RBP12.31□□□□□ -0.44
HMGN3-201ENST00000275036 VNN3Q9NY84 501 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 TAS2R1Q9NYW7 299 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
HMGN3-201ENST00000275036 DYSFO75923 2080 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 IGLV1-36A0A0B4J1U3 117 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 WNT9BO14905 357 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ARPC3O15145 178 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 SGCEO43556 437 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 DOK2O60496 412 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 RP2O75695 350 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 GAAP10253 952 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 COX5BP10606 129 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 HIST1H1CP16403 213 aaKnown RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 SLC6A6P31641 620 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 MMP15P51511 669 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 SELENOVP59797 346 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 PPP1CBP62140 327 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 CCL8P80075 99 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 MEP1BQ16820 701 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 CCDC92Q53HC0 331 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 MTX3Q5HYI7 312 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ZNF770Q6IQ21 691 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 LEG1Q6P5S2 330 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ZNF620Q6ZNG0 422 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 OR6V1Q8N148 313 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 OR4K13Q8NH42 304 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 SLC7A6Q92536 515 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 RDH5Q92781 318 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 NMNAT3Q96T66 252 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 WACQ9BTA9 647 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 IFT27Q9BW83 186 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 EGLN3Q9H6Z9 239 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 SLCO1C1Q9NYB5 712 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ASH2LQ9UBL3 628 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
HMGN3-201ENST00000275036 B9D1Q9UPM9 204 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
HMGN3-201ENST00000275036 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 KRT36O76013 467 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 TGFAP01135 160 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 ACHEP22303 614 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 IFNGR2P38484 337 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 HTR5AP47898 357 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
HMGN3-201ENST00000275036 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 AQP6Q13520 282 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 CCNIQ14094 377 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 ZNF718Q3SXZ3 478 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
HMGN3-201ENST00000275036 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 TRIM15Q9C019 465 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 SHARPINQ9H0F6 387 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 MUC13Q9H3R2 512 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 FN3KQ9H479 309 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 MAGIXQ9H6Y5 334 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
HMGN3-201ENST00000275036 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
HMGN3-201ENST00000275036 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
HMGN3-201ENST00000275036 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
HMGN3-201ENST00000275036 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 ACOT8O14734 319 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 RER1O15258 196 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms