RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF595Q8IYB9 648 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 ZSCAN1Q8NBB4 408 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 SLC41A2Q96JW4 573 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 UQCC2Q9BRT2 126 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 Q9N2J8 555 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 HRASLS2Q9NWW9 162 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 SLC16A7O60669 478 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 EIF3GO75821 320 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 RD3LP0DJH9 198 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 ID4P47928 161 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 TFF2Q03403 129 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 EGR4Q05215 589 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 EXOSC6Q5RKV6 272 aaKnown RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 BCORP1Q8N888 145 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 OR5AP2Q8NGF4 316 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 C16orf52Q8NHV5 167 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 CTHRC1Q96CG8 243 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SPACA5Q96QH8 159 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SEMA6CQ9H3T2 930 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 FAM60AQ9NP50 221 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 ATXN7L1Q9ULK2 861 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SGCEO43556 437 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 FGF19O95750 216 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 LINC00271P0C7V0 271 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF735P0CB33 412 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 S1PR1P21453 382 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 GJA4P35212 333 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 RPS21P63220 83 aaKnown RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 OR4A4PQ8NGN8 299 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 FLVCR1-AS1Q8TAF5 88 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SFT2D1Q8WV19 159 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 SLC25A21Q9BQT8 299 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 MMP25Q9NPA2 562 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 KLF2Q9Y5W3 355 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-202ENST00000273342 WDFY3Q8IZQ1 3526 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
COL8A1-202ENST00000273342 RENP00797 406 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TIMP1P01033 207 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CD8AP01732 235 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 PMP2P02689 132 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 HRH1P35367 487 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 SERPINF1P36955 418 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RFC3P40938 356 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RPS4XP62701 263 aaKnown RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 BIKQ13323 160 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 ELOCQ15369 112 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TANGO2Q6ICL3 276 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 FJX1Q86VR8 437 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TAAR8Q969N4 342 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RRNAD1Q96FB5 475 aaKnown RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 C1orf198Q9H425 327 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 EMC9Q9Y3B6 208 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 A0A1B0GTI1 187 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 LOC101059948A0A1B0GTJ6 334 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 MSGN1A6NI15 193 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 ADAP1O75689 374 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 GDI1P31150 447 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CD96P40200 585 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 EIF1AXP47813 144 aaKnown RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 DNASE1L1P49184 302 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 FAM109BQ6ICB4 259 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 LINC00346Q8IVM7 164 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 SLC22A18Q96BI1 424 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 VSTM2LQ96N03 204 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 NRSN2Q9GZP1 204 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CHMP1AQ9HD42 196 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 CKLFQ9UBR5 152 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 K7EQS6 105 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 XKRYO14609 159 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 STK17BO94768 372 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 GNB3P16520 340 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TACR3P29371 465 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 PTGFRP43088 359 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 MED25Q71SY5 747 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 EXD3Q8N9H8 876 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 OR4D6Q8NGJ1 314 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 MARCH1Q8TCQ1 289 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RPP25Q9BUL9 199 aaKnown RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 RSPH9Q9H1X1 276 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-202ENST00000273342 GSKIPQ9P0R6 139 aa11.62□□□□□ -0.55
COL8A1-202ENST00000273342 SERPINA5P05154 406 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms