RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CASTOR1Q8WTX7 329 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 GABRG3Q99928 467 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 SEMA6CQ9H3T2 930 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 PNO1Q9NRX1 252 aaKnown RBP24.71■■□□□ 1.55
CBX4-201ENST00000269397 ASF1BQ9NVP2 202 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 TMED7Q9Y3B3 224 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 LAMA1P25391 3075 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 TRIOO75962 3097 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 F5H0A9 414 aaPredicted RBP24.71■■□□□ 1.55
CBX4-201ENST00000269397 CTLA4P16410 223 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 CFPP27918 469 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 CXADRP78310 365 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 HHEXQ03014 270 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 SSBP1Q04837 148 aaKnown RBP24.71■■□□□ 1.55
CBX4-201ENST00000269397 PPP1R1AQ13522 171 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 SLC18B1Q6NT16 456 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 SLC22A18ASQ8N1D0 253 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 CST11Q9H112 138 aa24.71■■□□□ 1.55
CBX4-201ENST00000269397 PRMT8Q9NR22 394 aaPredicted RBP24.71■■□□□ 1.55
CBX4-201ENST00000269397 PHYHO14832 338 aa24.7■■□□□ 1.55
CBX4-201ENST00000269397 MAOBP27338 520 aa24.7■■□□□ 1.55
CBX4-201ENST00000269397 IGLV3-21P80748 117 aaPredicted RBP24.7■■□□□ 1.55
CBX4-201ENST00000269397 INSM1Q01101 510 aaPredicted RBP24.7■■□□□ 1.55
CBX4-201ENST00000269397 SNTB1Q13884 538 aaKnown RBP24.7■■□□□ 1.55
CBX4-201ENST00000269397 EIF2B1Q14232 305 aaKnown RBP24.7■■□□□ 1.55
CBX4-201ENST00000269397 PAPD4Q6PIY7 484 aaKnown RBP24.7■■□□□ 1.55
CBX4-201ENST00000269397 MICU1Q9BPX6 476 aa24.7■■□□□ 1.55
CBX4-201ENST00000269397 LRP12Q9Y561 859 aa24.7■■□□□ 1.55
CBX4-201ENST00000269397 COL4A2P08572 1712 aa24.7■■□□□ 1.55
CBX4-201ENST00000269397 TNFRSF10CO14798 259 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 OR2F2O95006 317 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 CXCR1P25024 350 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 BDKRB2P30411 391 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 TNFRSF4P43489 277 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 OR2F1Q13607 317 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 TEX30Q5JUR7 227 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 FAM109BQ6ICB4 259 aaPredicted RBP24.7■■□□□ 1.54
CBX4-201ENST00000269397 KCTD9Q7L273 389 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 ASB13Q8WXK3 278 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 MRGPRX1Q96LB2 322 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 ABHD6Q9BV23 337 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 EMC9Q9Y3B6 208 aa24.7■■□□□ 1.54
CBX4-201ENST00000269397 CD2P06729 351 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 ZNF117Q03924 483 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 FDX2Q6P4F2 183 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 ZNF584Q8IVC4 421 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 GAL3ST4Q96RP7 486 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 OR8D2Q9GZM6 311 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 MPTX1A8MV57 137 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 EEF1E1-BLOC1S5C9J1V9 151 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 ICOSLGO75144 302 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 PRTGQ2VWP7 1150 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 PABPC1L2AQ5JQF8 200 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 PRSS37A4D1T9 235 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 DISC1C4P0D8 188 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 PPM1FP49593 454 aaPredicted RBP24.69■■□□□ 1.54
CBX4-201ENST00000269397 OR7A5Q15622 319 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 PAN3Q58A45 887 aaKnown RBP24.69■■□□□ 1.54
CBX4-201ENST00000269397 ADGRE4PQ86SQ3 457 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 KDM8Q8N371 416 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 OR13C3Q8NGS6 347 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 FAM46BQ96A09 425 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 TSNAXQ99598 290 aaKnown RBP24.69■■□□□ 1.54
CBX4-201ENST00000269397 GMEB2Q9UKD1 530 aa24.69■■□□□ 1.54
CBX4-201ENST00000269397 SULT1C2O00338 296 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 VAMP1P23763 118 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 CASRP41180 1078 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 DNASE1L1P49184 302 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 RIDAP52758 137 aaKnown RBP24.68■■□□□ 1.54
CBX4-201ENST00000269397 GUCA2BQ16661 112 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 ACOT7LQ6ZUV0 252 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 OR4D6Q8NGJ1 314 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 MRGPRFQ96AM1 343 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 C8orf44Q96CB5 159 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 EDEM2Q9BV94 578 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 FAM117AQ9C073 453 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 GAREM1Q9H706 876 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 LOC101059948A0A1B0GTJ6 334 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 WIPF3A6NGB9 483 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 BGLAPP02818 100 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 ZNF345Q14585 488 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 ELOCQ15369 112 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 EDAQ92838 391 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 CCNL2Q96S94 520 aaPredicted RBP24.68■■□□□ 1.54
CBX4-201ENST00000269397 PRODH2Q9UF12 536 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 PURGQ9UJV8 347 aaKnown RBP24.68■■□□□ 1.54
CBX4-201ENST00000269397 PRELID3BQ9Y3B1 194 aa24.68■■□□□ 1.54
CBX4-201ENST00000269397 ATG12O94817 140 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 TNFP01375 233 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 RTN4RL2Q86UN3 420 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 MAP3K3Q99759 626 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 MBD2Q9UBB5 411 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 OR2AT4A6NND4 320 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 B4DGG1 531 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 FJX1Q86VR8 437 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 CATSPERDQ86XM0 798 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 PUSL1Q8N0Z8 303 aaKnown RBP24.67■■□□□ 1.54
CBX4-201ENST00000269397 CHST4Q8NCG5 386 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 GPBAR1Q8TDU6 330 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 ASB12Q8WXK4 309 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms