RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SCRT1Q9BWW7 348 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ZNF350Q9GZX5 532 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 MED17Q9NVC6 651 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ICKQ9UPZ9 632 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TMEM235A6NFC5 223 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TOX3O15405 576 aaPredicted RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 ZFPL1O95159 310 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TIMP2P16035 220 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 NPPBP16860 134 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 SRSF4Q08170 494 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 ZNF77Q15935 545 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 MESTQ5EB52 335 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TMEM220Q6QAJ8 160 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 PARM1Q6UWI2 310 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 CHRDL2Q6WN34 429 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ADIPOR2Q86V24 386 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 GABRG1Q8N1C3 465 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ADAD2Q8NCV1 583 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 TMEM104Q8NE00 496 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 OR2A12Q8NGT7 310 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ADAMTS17Q8TE56 1095 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ZBTB8AQ96BR9 441 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TM4SF18Q96CE8 201 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TMED7Q9Y3B3 224 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 URGCP-MRPS24S4R325 110 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TCF20Q9UGU0 1960 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 ZDBF2Q9HCK1 2354 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TEX13DA0A0J9YY54 714 aaPredicted RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 A0A1B0GV50 99 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SLC5A10A0PJK1 596 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 CRTAPO75718 401 aaPredicted RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 PAPLNO95428 1278 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 AMY2AP04746 511 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZNF735P0CB33 412 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBPL1P62380 186 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SLC22A6Q4U2R8 563 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 RPL7L1Q6DKI1 246 aaKnown RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 TCEAL6Q6IPX3 200 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZNF585AQ6P3V2 769 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 LRP11Q86VZ4 500 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ANGPTL5Q86XS5 388 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TRAPPC5Q8IUR0 188 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 OR51A7Q8NH64 312 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 MAFIPQ8WZ33 124 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 FGF14Q92915 247 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 Q96M85 177 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SLC6A7Q99884 636 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ATG5Q9H1Y0 275 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TRPM6Q9BX84 2022 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SCN2AQ99250 2005 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 IFNL4K9M1U5 179 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 LDLRAD4O15165 306 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 CTAG2O75638 210 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 NDUFS1P28331 727 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 FHITP49789 147 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ADPRHP54922 357 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 EIF2B1Q14232 305 aaKnown RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 HSD11B1LQ7Z5J1 315 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 OR51A4Q8NGJ6 313 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 OR51F2Q8NH61 342 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 PHYHIPQ92561 330 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SMARCD2Q92925 531 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SLC41A3Q96GZ6 507 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 SLC35G5Q96KT7 338 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TMEM208Q9BTX3 173 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TEX101Q9BY14 249 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 PLA2G2FQ9BZM2 168 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ADAM18Q9Y3Q7 739 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 NCOR1O75376 2440 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3DA0A087WVF3 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3IA0A087WXS9 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3EA0A087X179 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3KA0A087X1G2 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 A0A1W2PPC1 479 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3FA6NER0 549 aaPredicted RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 SEC14L6B5MCN3 397 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3LB9A6J9 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 LATO43561 262 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TMPRSS11DO60235 418 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 F13BP05160 661 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 CTSLP07711 333 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 OR8G3PP0DMU2 310 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3CQ6IPX1 549 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 FOXRED2Q8IWF2 684 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 CDK20Q8IZL9 346 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 TBC1D3Q8IZP1 549 aaPredicted RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 LINC00471Q8N535 108 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 PNLDC1Q8NA58 520 aaKnown RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZNF248Q8NDW4 579 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZNF480Q8WV37 535 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 OR5P2Q8WZ92 322 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 WDR92Q96MX6 357 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZDHHC5Q9C0B5 715 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 GLIPR2Q9H4G4 154 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 ZCCHC3Q9NUD5 404 aaKnown RBP7.92□□□□□ -1.14
VAPB-201ENST00000265619 PRODH2Q9UF12 536 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms