RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 NT5CQ8TCD5 201 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 RRNAD1Q96FB5 475 aaKnown RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 ASB16Q96NS5 453 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 OR5B2Q96R09 309 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 TM7SF3Q9NS93 570 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 C19orf53Q9UNZ5 99 aaPredicted RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 FARSAQ9Y285 508 aaKnown RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 C5orf42Q9H799 3197 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 A0A087WV62 115 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 A0A1W2PS29 197 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 OR10H2O60403 315 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 ARG1P05089 322 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 ZNF735P0CB33 412 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 HOXA6P31267 233 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 TLX1P31314 330 aaPredicted RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 BTN3A2P78410 334 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 FAM78AQ5JUQ0 283 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 CDRT4Q8N9R6 151 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 CCDC54Q8NEL0 328 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 TNFRSF13CQ96RJ3 184 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 PISDQ9UG56 409 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 VSIG4Q9Y279 399 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 POMT1Q9Y6A1 747 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 TRAV8-7A0A075B6U6 113 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 C13orf42A0A1B0GVH6 325 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 A0A1W2PPC1 479 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 P2RX6O15547 441 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 RPP14O95059 124 aaKnown RBP11.84□□□□□ -0.51
NUP54-201ENST00000264883 P2RY2P41231 377 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 VIPR2P41587 438 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 NDUFA6P56556 154 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 IL13RA1P78552 427 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 HYAL4Q2M3T9 481 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 ARHGAP40Q5TG30 622 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SLC25A42Q86VD7 318 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
NUP54-201ENST00000264883 OR52E1Q8NGJ3 308 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 OR5AK2Q8NH90 309 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 ADAM19Q9H013 955 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 TMEM184BQ9Y519 407 aaPredicted RBP11.84□□□□□ -0.51
NUP54-201ENST00000264883 HEBP2Q9Y5Z4 205 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 OR52A4PA6NMU1 304 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 H7C1Q1 480 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 CDC40O60508 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUP54-201ENST00000264883 CSN2P05814 226 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 COX5BP10606 129 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 GRPRP30550 384 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SLC6A9P48067 706 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 RSU1Q15404 277 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 C21orf62-AS1Q17RA5 79 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 AWAT2Q6E213 333 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 FRMD1Q8N878 549 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 OR10D4PQ8NGN7 298 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 CA5BP1Q8WTZ4 195 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SMARCD2Q92925 531 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 Q96M85 177 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 SERINC2Q96SA4 455 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 RNF126Q9BV68 326 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 CST11Q9H112 138 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 PHPT1Q9NRX4 125 aaPredicted RBP11.84□□□□□ -0.51
NUP54-201ENST00000264883 USP36Q9P275 1121 aaKnown RBP11.84□□□□□ -0.51
NUP54-201ENST00000264883 KCNG2Q9UJ96 466 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 HEATR5BQ9P2D3 2071 aa11.84□□□□□ -0.51
NUP54-201ENST00000264883 MDC1Q14676 2089 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 DOCK8Q8NF50 2099 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 A0A0B4J2E0 115 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 A0A1B0GX12 115 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 ZNF736B4DX44 427 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 EIF1AYO14602 144 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 BCAT2O15382 392 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 LRP3O75074 770 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 CYB5AP00167 134 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 IL2RAP01589 272 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SERPINA5P05154 406 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 GUSBP08236 651 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 HIST1H1CP16403 213 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 ZNF10P21506 573 aaPredicted RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
NUP54-201ENST00000264883 DIO1P49895 249 aa11.83□□□□□ -0.52
NUP54-201ENST00000264883 SULT1A1P50225 295 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms