RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 STRADBQ9C0K7 418 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 NRIP3Q9NQ35 241 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 TUBG2Q9NRH3 451 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 A0A1W2PPV9 198 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 ZNF850A8MQ14 1090 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 ZNF264O43296 627 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 GPRIN2O60269 458 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 PRAF2O60831 178 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 TMEM225BP0DP42 221 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 HIST1H1CP16403 213 aaKnown RBP8.68□□□□□ -1.02
SIM1-201ENST00000262901 ZNF43P17038 809 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 HNF1AP20823 631 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 CRABP1P29762 137 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 EVX1P49640 407 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 RAB2AP61019 212 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 HERV-K104P61576 105 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 IL13RA1P78552 427 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
SIM1-201ENST00000262901 MELKQ14680 651 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 OPCMLQ14982 345 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 WBP2NLQ6ICG8 309 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 NDUFAF7Q7L592 441 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 KANSL1Q7Z3B3 1105 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 ABHD12BQ7Z5M8 362 aaPredicted RBP8.68□□□□□ -1.02
SIM1-201ENST00000262901 LINC00346Q8IVM7 164 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 BPIFB2Q8N4F0 458 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 PLPP7Q8NBV4 271 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 TMEM185AQ8NFB2 350 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 OR51Q1Q8NH59 317 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 MARS2Q96GW9 593 aaKnown RBP8.68□□□□□ -1.02
SIM1-201ENST00000262901 SLC38A1Q9H2H9 487 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 TMEM9BQ9NQ34 198 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 DKKL1Q9UK85 242 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 A4GNTQ9UNA3 340 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 RHBDD3Q9Y3P4 386 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
SIM1-201ENST00000262901 A0A0A6YYH2 397 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 NAP1L6A6NFF2 107 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SERINC4A6NH21 518 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 A6NJ64 397 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 J3KRW8 73 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ZNF593O00488 134 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 TXNL1O43396 289 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 NTN1O95631 604 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ERCC1P07992 297 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 SPP1P10451 314 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ST6GAL1P15907 406 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 HSD11B2P80365 405 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SKP2Q13309 424 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 MEP1BQ16820 701 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 TCEAL6Q6IPX3 200 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ZNF793Q6ZN11 406 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 CAMKMTQ7Z624 323 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ZNF546Q86UE3 836 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 CCDC190Q86UF4 302 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SFTPA2Q8IWL1 248 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 OR13C9Q8NGT0 318 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 OR5B2Q96R09 309 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 DCLRE1CQ96SD1 692 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 LMF2Q9BU23 707 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 OR10A5Q9H207 317 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ACKR4Q9NPB9 350 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SDHAF2Q9NX18 166 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ING1Q9UK53 422 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 RARRES3Q9UL19 164 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 HHLA2Q9UM44 414 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 STARD10Q9Y365 291 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 TRBV5-3A0A0A0MS03 114 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 HLA-AP01891 365 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 DLSTP36957 453 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 GLP1RP43220 463 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 FXYD4P59646 89 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 CSNK2A1P68400 391 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 CLINT1Q14677 625 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 GSG1LQ6UXU4 331 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SLC25A45Q8N413 288 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 C12orf45Q8N5I9 185 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 CSNK2A3Q8NEV1 391 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 NXF5Q9H1B4 397 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 FLVCR2Q9UPI3 526 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SLC6A5Q9Y345 797 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 TDRD6O60522 2096 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 IGHV1OR21-1A0A087WYE8 117 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 CXorf65A6NEN9 183 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SLC33A1O00400 549 aaPredicted RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 SLC2A1P11166 492 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 MYF5P13349 255 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 ANXA7P20073 488 aaKnown RBP8.67□□□□□ -1.02
SIM1-201ENST00000262901 HTR2AP28223 471 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 MSX1P28360 303 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 GFERP55789 205 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 RAB4BP61018 213 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 TPBGQ13641 420 aa8.67□□□□□ -1.02
SIM1-201ENST00000262901 SNTB1Q13884 538 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms