RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FOXN4Q96NZ1 517 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 EDEM2Q9BV94 578 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 NXF2Q9GZY0 626 aaKnown RBP7.45□□□□□ -1.22
PTPN3-201ENST00000262539 EGLN3Q9H6Z9 239 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 LOXL2Q9Y4K0 774 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 SUSD5O60279 629 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 FADS1O60427 444 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 ACAA2P42765 397 aaKnown RBP7.45□□□□□ -1.22
PTPN3-201ENST00000262539 PRKXP51817 358 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 GRB2P62993 217 aaKnown RBP7.45□□□□□ -1.22
PTPN3-201ENST00000262539 AQP6Q13520 282 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 THEM4Q5T1C6 240 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 FDX2Q6P4F2 183 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 KCNIP4Q6PIL6 250 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 NDUFAF7Q7L592 441 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 KIF18BQ86Y91 864 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF679Q8IYX0 411 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 SAMD12Q8N8I0 201 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 ZBTB44Q8NCP5 570 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 MAFIPQ8WZ33 124 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 ULBP2Q9BZM5 246 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 OR2S2Q9NQN1 319 aa7.45□□□□□ -1.22
PTPN3-201ENST00000262539 LSM5Q9Y4Y9 91 aaKnown RBP7.45□□□□□ -1.22
PTPN3-201ENST00000262539 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 SPCS2Q15005 226 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ZMAT1Q5H9K5 638 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TEX30Q5JUR7 227 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 OXGR1Q96P68 337 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TRIB1Q96RU8 372 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 DEFB127Q9H1M4 99 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CDCP1Q9H5V8 836 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GP6Q9HCN6 339 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 RAB27BO00194 218 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CSO75390 466 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 IFNA4P05014 189 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 SERPINE2P07093 398 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CD79BP40259 229 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 AQP2P41181 271 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CD97P48960 835 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 NOVA1P51513 510 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 BTG1P62324 171 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CCDC190Q86UF4 302 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 SLIRPQ9GZT3 109 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 M0R1B8 84 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CYB561P49447 251 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CLDN17P56750 224 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 AKR1C8PQ5T2L2 129 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 SFRP5Q5T4F7 317 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 Q6ZPB1 254 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TMPRSS7Q7RTY8 843 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CPEB3Q8NE35 698 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF721Q8TF20 911 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 C10orf35Q96D05 121 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 OR5M11Q96RB7 305 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TMEM59Q9BXS4 323 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 QRSL1Q9H0R6 528 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 OR51E2Q9H255 320 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TNFRSF19Q9NS68 423 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 STEAP1Q9UHE8 339 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 FAM166BA8MTA8 275 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 PIP5K1CO60331 668 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TNFSF15O95150 251 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 HOXB3P14651 431 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 FOLR1P15328 257 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 EPHA2P29317 976 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ERP29P30040 261 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 OPRL1P41146 370 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 RAC1P63000 192 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ERVK-25P63136 954 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 AGAP7PQ5VUJ5 663 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TMEM236Q5W0B7 351 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TMEM200AQ86VY9 491 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 DUSP19Q8WTR2 217 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 OR8B4Q96RC9 309 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 LIN28AQ9H9Z2 209 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 RBFOX1Q9NWB1 397 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF107Q9UII5 783 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 H7C1Q1 480 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CREBL2O60519 120 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 MT-CO3P00414 261 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 F2RL1P55085 397 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 DSCR4P56555 118 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CARD18P57730 90 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 S100A12P80511 92 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 COL28A1Q2UY09 1125 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 BTLAQ7Z6A9 289 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF441Q8N8Z8 693 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 PSMF1Q92530 271 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 EGLN1Q9GZT9 426 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 FUOMA2VDF0 154 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 PRSS37A4D1T9 235 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GABRPO00591 440 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 IFNA10P01566 189 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 IFNA7P01567 189 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 CT62P0C5K7 136 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 SERPINA2P20848 420 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms