RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SGCEO43556 437 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 NGFP01138 241 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 MMP15P51511 669 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 PRKCDQ05655 676 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 KRT72Q14CN4 511 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 HSP90B2PQ58FF3 399 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 FGD3Q5JSP0 725 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 USP43Q70EL4 1123 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 VTCN1Q7Z7D3 282 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-202ENST00000262396 SYT9Q86SS6 491 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 OFCC1Q8IZS5 231 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 POU5F2Q8N7G0 328 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 OR5L1Q8NGL2 311 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 FAM216AQ8WUB2 273 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 ACOT11Q8WXI4 607 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-202ENST00000262396 WACQ9BTA9 647 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 TMPRSS13Q9BYE2 586 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 G6PC2Q9NQR9 355 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 POLE4Q9NR33 117 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 A4GNTQ9UNA3 340 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 TMEM5Q9Y2B1 443 aa10.39□□□□□ -0.75
TRAF4-202ENST00000262396 J3KTA2 159 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 FXYD1O00168 92 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 NDUFAB1O14561 156 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 PRSS23O95084 383 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 IGHMP01871 453 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 TUBG1P23258 451 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 LIPEQ05469 1076 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 ZBED5Q49AG3 693 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 ESCO2Q56NI9 601 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 DNM1P34Q6PK57 102 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 MBOAT2Q6ZWT7 520 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 RP9Q8TA86 221 aaKnown RBP10.38□□□□□ -0.75
TRAF4-202ENST00000262396 CMBLQ96DG6 245 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 PLA2G12AQ9BZM1 189 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 TUBG2Q9NRH3 451 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 ARMCX1Q9P291 453 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 OR5V1Q9UGF6 321 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 EGFL7Q9UHF1 273 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 PURGQ9UJV8 347 aaKnown RBP10.38□□□□□ -0.75
TRAF4-202ENST00000262396 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 PPIAL4AQ9Y536 164 aa10.38□□□□□ -0.75
TRAF4-202ENST00000262396 SPRY1O43609 319 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 AHCYL1O43865 530 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 SLC16A7O60669 478 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 CCDC22O60826 627 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 DEAF1O75398 565 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 KHDRBS3O75525 346 aaKnown RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 UBOX5O94941 541 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 NDUFB2O95178 105 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 SERPINA1P01009 418 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 CD14P08571 375 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 TSPAN19P0C672 248 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 COX5BP10606 129 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 GUCY1A3Q02108 690 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 PSG7Q13046 419 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 AQP6Q13520 282 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 KRR1Q13601 381 aaKnown RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 ENDOGQ14249 297 aaKnown RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 SLC27A4Q6P1M0 643 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 OR5AS1Q8N127 324 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 SGMS2Q8NHU3 365 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 PTP4A1Q93096 173 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 NMD3Q96D46 503 aaKnown RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 FAM46AQ96IP4 442 aaKnown RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 HSH2DQ96JZ2 352 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 SAMD8Q96LT4 415 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 Q96M85 177 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 GPA33Q99795 319 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 HOPXQ9BPY8 73 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 KCTD14Q9BQ13 255 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-202ENST00000262396 EFCAB1Q9HAE3 211 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 RPS6KA6Q9UK32 745 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 ADAM18Q9Y3Q7 739 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 AUP1Q9Y679 476 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 NBEAL1Q6ZS30 2694 aa10.37□□□□□ -0.75
TRAF4-202ENST00000262396 A0A087WUU8 490 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 TEX13CA0A0J9YWL9 993 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 PRSS37A4D1T9 235 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 LRRC30A6NM36 301 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 SLC22A2O15244 555 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 AVPP01185 164 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 H1F0P07305 194 aaKnown RBP10.36□□□□□ -0.75
TRAF4-202ENST00000262396 CD55P08174 381 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 ADH4P08319 380 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 IRF2P14316 349 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 RGS6P49758 472 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 SLC7A2P52569 658 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 BTG1P62324 171 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 GPR139Q6DWJ6 353 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 TBPL2Q6SJ96 375 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 BTNL3Q6UXE8 466 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 JAZF1Q86VZ6 243 aa10.36□□□□□ -0.75
TRAF4-202ENST00000262396 GLB1L2Q8IW92 636 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms